| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2846 |
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| Symbol | |
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| ID | 8226419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 3511544 |
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| End bp | 3512758 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644930676 |
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| Product | ATP-dependent carboxylate-amine ligase domain- containing protein |
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| Protein accession | YP_003087226 |
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| Protein GI | 255036605 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.435021 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.117516 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAAA CTCTGACTTT TCTCTGCATT TCTACCTATT TCAAAGGCAA CGACTTTTTG
AAGGCTCTTA AAGATGCCGG CAACAAGGTT TTTCTGATCA CCGCGAAAAA ACTGGAACAT
AAGCCGTGGG TCAGGGAAGC TGTCGACGAA TTTTTCTATG TGGAGGAGGA AGAGGATGGG
ACGTATAACA TGAACGAGAT CATCACCGGT CTCGCGTACG TGATGCGCAC CCGCCCGATC
GACCGCGTGG TGGCGCTCGA CGATTACGAT GTTGAAAAAG CGGCGCATAT CCGCGAATAT
TTCCGCATTC CTGGGATGGG ACAGACCACC GGCCGCTATT TCCGCGACAA GCTGGCCATG
CGCACGAAGG CGCTCGAATC GGGCATTCTC GTTCCGGGTT TTTCGGCGCT TTTCAATGAT
GATCAGATCA ACCGTTTTAT TGAAAAACAT CCCGGTCCGT GGATGATCAA ACCGCGCTCG
GAAGCATCGG CGCTGGGCAT TCAAAAGCTC AGCACGGCGG AAGAACTTTG GAACACCATT
CACGACCTCG GGGATAAGCG GCATGCTTAT CTCGTGGAAC AATACAAAGC CGGCGACGTC
TACCACGTCG ATTCTATATC TTACAATGGA ATCGTTATAT TCTCCTGGAA CAGCAAATAC
CTCGCGCCGC CATTCGACGT GGCTCATGGC GGAGGCATAT TCCGCTCGGT AACCGTCCCG
TTCGATTCTT CCGAGGAACA CGCATTGCAG ACGCTCGCGG TGGATTTGCT CAAAGCTTTT
GGGTTGAAAC ACAGCGCTTC ACACACCGAG GTGATCCGTT GCCACGACGA TGGTAAATAC
TATTTCCTGG AAACATCGTC GCGCGTAGGA GGTGCACACC TTTCGGAAAT GGTCGAAGCC
TCGTCGGGAA TTAACCTCTG GAAGGAATGG GCGCGAATGG AAACGGCCGA GGCAAAGGGT
GAAAACTACA AGCTGCCCGC CGTTCGGAAA GAATATGCCG GTATCCTCAT CTCGCTCGCC
CGCCAGGAAT GGCCCGACCT ATCGGTATTC AATGACCCGG AAGTGGTGTG GCGCATGAAC
GAGCCGCATC ACGTGGGACT GGTGATACGC TCAAAATCAC GCGATAAGGT GCTGGAAATC
ATGGATAAAT ACGCTGCCAT TATCCAGAAG AAATACCACG CTTCTGCCCC GGTTCCGAAG
AAGCCGGCGC ATTAG
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| Protein sequence | MTQTLTFLCI STYFKGNDFL KALKDAGNKV FLITAKKLEH KPWVREAVDE FFYVEEEEDG
TYNMNEIITG LAYVMRTRPI DRVVALDDYD VEKAAHIREY FRIPGMGQTT GRYFRDKLAM
RTKALESGIL VPGFSALFND DQINRFIEKH PGPWMIKPRS EASALGIQKL STAEELWNTI
HDLGDKRHAY LVEQYKAGDV YHVDSISYNG IVIFSWNSKY LAPPFDVAHG GGIFRSVTVP
FDSSEEHALQ TLAVDLLKAF GLKHSASHTE VIRCHDDGKY YFLETSSRVG GAHLSEMVEA
SSGINLWKEW ARMETAEAKG ENYKLPAVRK EYAGILISLA RQEWPDLSVF NDPEVVWRMN
EPHHVGLVIR SKSRDKVLEI MDKYAAIIQK KYHASAPVPK KPAH
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