| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2624 |
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| Symbol | |
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| ID | 8226196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 3239412 |
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| End bp | 3242567 |
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| Gene Length | 3156 bp |
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| Protein Length | 1051 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644930455 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003087006 |
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| Protein GI | 255036385 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTAAAG TTCTACTCTT ATTTATATGG GCTTGTCTGT GTTCCCCGGT TGCTTTGGCG
CAAGTGCGCC AGCTCACCGG CAAGGTAACG GCAGCCGATG ATGGTCTCGG ACTTGCAGGC
GCGTCAATCA TTTACAAAGG CACCAATGTG GGCACGAATG CCGATGCCGA CGGAAATTTC
AGCTTTTCGG TTCCGGGTGA CGGCGTGCTC GTCATTTCTT ACGTAGGTTT TCTGATCAAA
GAGTTGCCGA TCGGCAACCA AACCAAATTT GACATCAAGC TGGACGCCGA CACGCGACAG
CTGGCCGAGG TGGTGGTTAC CGCATTCGGT ATCGAGCGTG AGAAAAAGGC GTTGGGATAT
ACAGTACAGG AAGTAAAAGG AAGCGCGCTG ACGGAATCGC GCTCGACGAA CGTGGCGAAT
GCACTTTCTG GTAAAATCGC CGGGGTGCGC GTACAATCGA ACGGCGGTCC GGGCAGCGGT
TCCACGATCC AGATCCGCGG CTCATCGTCC GTTTCGGGCA ATAACCAGCC GCTGATCGTG
ATCGACGGCG TGCCGATGGA GCAAACCGCC AATAAAACCT GGGGCGGCGG CATTTCGGAG
ATCAACCCCG ATAATATCAA GGAAATGTCG GTACTCAAAG GGCCTAATGC GGCTGCATTG
TACGGCTCGC GCGCTGCCAA CGGCGTTATT TTGATTACTA CCAAAAACGG CCAGGGCACA
AAAGGTCTTG GTGTGGACAT CAACTCCAAC ATCAGCTTTG AGCGCCCGTG GATCAAACCG
AACTTCCAGA ACACTTACGG CGGCGGAAAT GGCTACCGCA CCTGGTATAA CGACGGGTGG
AGCGGCAACA TCACCGATCC GGCAGAAATT GCGCAGTATC GCGCCGTTTA TGACGCAAGA
TATCCTCTGG TTGGATCAGA GGGGACCGAC GAAAGCTGGG GAGCTCCGAT GGACGGACGC
CTGGTGAGAC AGTGGTGGAC TGGTGACGAT GTTGCACCAC TGACTCCTCA GCCCAACAAC
TGGGACGAAT ACTGGAACAC CGGCCGCACG ATCACCAACA GCATTGCGCT GAACGGCGGC
AACGACAAAG GCTACTTCCG CCTCGGCCTG AGCCGCGTGG ACCAGACGGG CATTATGTAT
TACAATGATT TCCACCGGAA CAACTTCCGC ATTAATTCGG GCTATAATCT CACCAAAAAC
CTGAGCATTA CGCTTTCGGG CGAGTATATC AAATCCGGCT CGGACAACAA AAGCTACGGC
AGCGGACAGG AATTTATCTG GTCGCACCGG CACGTTTCCT GGGCGCAATT GCGGGATTAC
GAAAGCTACA CCGGCGTGCA CAACCAGCGC GGCAACGACA CCGATCCGCC TAACTGGCAG
CATACCTTCT TCACCAACCC GTATTTCTCG CAGCGCAACC TGCCTCAAAG CAACGAAAAG
GACCGCCTGC TGGGTAACAT CGCATTGAAC TACAAGATTT TACCATCACT GAGCATTATG
CTCCGCAGCG GCACCGATTA CTGGTCGGAT ACCCGCGTGA ATGTGTCCAA CTTCCTCCGC
GTCCGCAACG GCGTACGCAC GCCGGGCCGC TTCTCCGAAG AAGTGCTCCG CAGCCAGGAA
ACCAACTCGG ATTTCATGCT GACTTACAAC AAGGACATTT CAGCTGATTT CGGGCTGAAC
GTGCAGGTCG GTGGCATTCA ACGGACTAAT TATTACAAAA GAAACTATTT CTATGTAGGC
GAAATGGTGG TAGACGGCCT CTACAATGCG GGCAACTCCG TTCCAAGCCA AAACACCATT
GAAAGCGAAA TCCGCAAATC GGAGACGCAG AGCTTGTTCG GGACGGCTAA CCTTTCGTGG
AGGGATGCAT TGTTCCTCGA CCTCACTGCC CGCAACGACT GGTCGAGCAC GCTGCCTGCG
AATGCACGCT CGTACTTCTA CCCTTCCGCG TCATTGAGTG CGGTGCTCAC GGAATTGTTT
GATGTAAAAA GCAATGTGTT CACGTTCGGC AAAGTACGTG CGAGCTATGC ACAGGTAGGT
AACGACGCCA CGCCTTACCA ATTGGCCCAA ACCTTCCTCG CCAAAGGCTC CTGGAATGGC
GCAGTGCCCA AATTTTCCGA AAACATCGAA ATCGCAAACA GCGGTTTGAA GCCGGAAATC
ACGACCGGCC TTGAACTCGG CGCCGACCTC CGGTTTTTGA AAGGCAAAAT CGGCCTGGAT
GTGACTTATT ACAAACAGAC GACCAAAGAC CAGATCCTCG GCGTGGAAAT TTCCAAAGCG
AGCGGCTACA ACACCCGCAT TCTGAATGCC GGAAAAATCA CCAACCAGGG CGTTGAAATC
TCGGTATCAG GCACGCCGGT GAAGCTGGCC GGCGGTTTCA GCTGGGACGT CTCGCTCAAC
TGGGCGCGCA ACCGCAACAA AGTGATTGAA CTGGCAGAAG GACTCACTAC CTACACGCTT
GCCACACAGC GCGGCATGTC GTCGGAAGCA CGTGTGGGCC AGCCTTATGG CACATTTTAC
GGCGTGGGTT TCCAGAAACA CAATGGACAG ATCGTGTACG GTGCCAATGG ATTGCCACTG
ACAGCCGCCG GACAAATGCT GGGTAACATC CAGCCCGACT GGATCGGTGG TATGCTGAAC
ACATTGAATC ACAAAGGCTT CTCACTGAGC GCATTGGTGG ACGTGCGCAT GGGTGGCGAC
ATTTATGACG AAGGCACCGG CACCGCGCGC TGGACGGGCC AATATGCCGA AACGGCACTG
GGCCGCGAAG AAGGCGTGAT CGGCCAGGGT GTGCGGGAAG TGACGGCTGC GGATGGTTCC
AAATCCTTTG TGCCGAACGA CATTATCGTC ACTGCCAATC AGCTTTATGG TTATGCCAAT
CCGCGCAACT ACCACGAATC GGCGATTTTC GATGCGAGCT ATGTGAAGCT GCGTGAAGTG
TCGCTCGGCT ACTCGTTCAG CCCGTCGCTT TTGAAAAAGG TAAAAATCCA GTCGGCCAAG
ATCTCGCTCG TGGGCCGGAA CGTTTGGATG ATCTTCAAAA ACACCCCGCA TATCGATCCG
GAGATCGATG CGAAAGGGGG TAACCAGCAA GGATTCGGTT ATGGTGAGCT GCCCAGCTCC
CGCAGCATTG GCGCAAACCT CTCGCTGTCG TTCTGA
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| Protein sequence | MRKVLLLFIW ACLCSPVALA QVRQLTGKVT AADDGLGLAG ASIIYKGTNV GTNADADGNF
SFSVPGDGVL VISYVGFLIK ELPIGNQTKF DIKLDADTRQ LAEVVVTAFG IEREKKALGY
TVQEVKGSAL TESRSTNVAN ALSGKIAGVR VQSNGGPGSG STIQIRGSSS VSGNNQPLIV
IDGVPMEQTA NKTWGGGISE INPDNIKEMS VLKGPNAAAL YGSRAANGVI LITTKNGQGT
KGLGVDINSN ISFERPWIKP NFQNTYGGGN GYRTWYNDGW SGNITDPAEI AQYRAVYDAR
YPLVGSEGTD ESWGAPMDGR LVRQWWTGDD VAPLTPQPNN WDEYWNTGRT ITNSIALNGG
NDKGYFRLGL SRVDQTGIMY YNDFHRNNFR INSGYNLTKN LSITLSGEYI KSGSDNKSYG
SGQEFIWSHR HVSWAQLRDY ESYTGVHNQR GNDTDPPNWQ HTFFTNPYFS QRNLPQSNEK
DRLLGNIALN YKILPSLSIM LRSGTDYWSD TRVNVSNFLR VRNGVRTPGR FSEEVLRSQE
TNSDFMLTYN KDISADFGLN VQVGGIQRTN YYKRNYFYVG EMVVDGLYNA GNSVPSQNTI
ESEIRKSETQ SLFGTANLSW RDALFLDLTA RNDWSSTLPA NARSYFYPSA SLSAVLTELF
DVKSNVFTFG KVRASYAQVG NDATPYQLAQ TFLAKGSWNG AVPKFSENIE IANSGLKPEI
TTGLELGADL RFLKGKIGLD VTYYKQTTKD QILGVEISKA SGYNTRILNA GKITNQGVEI
SVSGTPVKLA GGFSWDVSLN WARNRNKVIE LAEGLTTYTL ATQRGMSSEA RVGQPYGTFY
GVGFQKHNGQ IVYGANGLPL TAAGQMLGNI QPDWIGGMLN TLNHKGFSLS ALVDVRMGGD
IYDEGTGTAR WTGQYAETAL GREEGVIGQG VREVTAADGS KSFVPNDIIV TANQLYGYAN
PRNYHESAIF DASYVKLREV SLGYSFSPSL LKKVKIQSAK ISLVGRNVWM IFKNTPHIDP
EIDAKGGNQQ GFGYGELPSS RSIGANLSLS F
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