Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_2456 |
Symbol | |
ID | 8226028 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 3025577 |
End bp | 3026683 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644930288 |
Product | Bile acid:sodium symporter |
Protein accession | YP_003086839 |
Protein GI | 255036218 |
COG category | [R] General function prediction only |
COG ID | [COG0385] Predicted Na+-dependent transporter |
TIGRFAM ID | [TIGR00841] bile acid transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATATTT ACAAGCTCAT GTCCGGCATT GCCGCGGTTT GCCTGCTGAT AGCGCTTTAC CTCGCATTCA CCGGAAGCCT CCCTTCGGCC GGTCCCTTCT TTATTGCATT CTTCCTATCC ACAGCCATCA GTTTCAGGGG GTATGAAAAA CTGAAAGGCT TTACCTACAC CACCGTCATC TTTGCGGCGG TGACCACTGC ATTATATTAT CCGCAGCATT TCCTGACCGT CGGCGACTTT AAACTTGCAG CGCTAATCAC TCCACTCATC CAGATCATCA TGTTCGGAAT GGGCACTTCC ATGAGCTTCG GGGATTTTGT GGGGGTAGTT AAAATGCCGA AAGGTGTATT GATCGGCGTG ATCAGCCACT TCATCATCAT GCCTACGATC GGTTACACGC TTGCTAACCT CAGCGGCTTT CCCCCTGAAA TAGCGGCGGG GATTATCCTG ATCGGCTGCT CGCCCAACGG CATGGCATCC AATGTGATTT CCTACCTCGC GAAAGCGAAC CTGGCATTGT CCATTACCAT CACCGCCATT TCCACCATGC TCGCCCCGAT CGTCACGCCG CTGCTGATGA GCATGCTCGC GGGTGCATTC GTGCAGATCG ATACGCTGCA TATGATGTGG GATATTATCA AAATGGTGAT TATTCCAATC GGCGCGGGAC TGATTTTCAA TAAGCTGTTC AGCGGCAAAG TGAAGTGGCT TGACGCCGCG ATGCCCATCG TGTCAATGGC CGGTATCGCA TTCATTATCG TGATCATCAC TGCTGCCGGT CGCGACAGCC TGCTATCGAT CGGTCCTGCA TTGCTATTGC TCGTGCTGAT CCACAACCTG TCGGGCTACA CGCTTGGCTA CTGGTCGGGC CGCCTGTTCC GCATGAGCGA GCGCGACTGC CGCACGATAG CGATCGAAGT GGGAATGCAA AACGGCGGAT TGGCCTCCGG TATCGCCAAG GAAATGGGCA AAATGGCCAC CGTAGGCCTC GCCCCGGCCA TTTTCGGGCC GCTGATGAAC ATTACCGGCT CCATCCTTGC TTCCTGGTGG CAAGGCAAGC CCACCGGCGA TGAAGAAACT TATGTAGAAA CGGGCAGAGC CCATTAA
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Protein sequence | MNIYKLMSGI AAVCLLIALY LAFTGSLPSA GPFFIAFFLS TAISFRGYEK LKGFTYTTVI FAAVTTALYY PQHFLTVGDF KLAALITPLI QIIMFGMGTS MSFGDFVGVV KMPKGVLIGV ISHFIIMPTI GYTLANLSGF PPEIAAGIIL IGCSPNGMAS NVISYLAKAN LALSITITAI STMLAPIVTP LLMSMLAGAF VQIDTLHMMW DIIKMVIIPI GAGLIFNKLF SGKVKWLDAA MPIVSMAGIA FIIVIITAAG RDSLLSIGPA LLLLVLIHNL SGYTLGYWSG RLFRMSERDC RTIAIEVGMQ NGGLASGIAK EMGKMATVGL APAIFGPLMN ITGSILASWW QGKPTGDEET YVETGRAH
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