Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_2128 |
Symbol | |
ID | 8225700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 2596104 |
End bp | 2597564 |
Gene Length | 1461 bp |
Protein Length | 486 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644929965 |
Product | L-fucose isomerase-like protein |
Protein accession | YP_003086516 |
Protein GI | 255035895 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2407] L-fucose isomerase and related proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.277865 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAGTA TCGGAGTCAT TATTGGTAAC AGGGATTTCT TTCCGGACCG GCTGGTGGCC GAGGCGCGGG TGGAGATCGT TGATTTGCTT AAAAAATTGA ATATCAATGA GATTATGCTC GATACCGAGG CTACCAAGCT CGGGGGTGTC GAGACGTTCC AGGATGCGCA GAAATGCGCC GCATTGTTCC GGGCGCACCG GGATGAGATC ATGGGCGTGC TCGTGGTGCT GCCCAATTTC GGGGATGAAC GCGGCATTGC CGAGACATTG AAACTGGCCG ATCTGAATGT GCCTGTTTTG GTGCAAGGTT ATCCCGACGA TCTGGACAAG CTGGATGTAG CCCGCCGCCG CGATTCGTGG TGCGGCAAGA TTTCAGCCTG CAATAACCTG TATCAGTTTG GCATCAAATA CACGCTCACG ACGAAGCACG TCGTGCATCC GACCGATCCT TCATTCATTA AGGACCTGAA CGATTTCGTG GCGGTTTGCC GCGTGACCAA AGGGCTTCGA AATGTCCGCA TTGGCGCGAT TGGCGCTCGT CCGGGCGGGT TCAATACCGT TCGTTATAGC GAGAAAATAT TGCAGCGGAA TGGCATTTCG GTCGTGACGG TGGATTTGTC GGAGATTTTG GGTAATGCTA ATAAGCTGAC TGCGCAGGAT TCGAAAGTAA AAGAAAGATT AGATAAAATC ACTTCCTACG CCTCCCGCGG GCGCACGCCG GACGAAGCAT TGATCCAAAT GGCGAAGCTG GATGTGGTTT TGGGAGACTT TATTGAAGCT AATGCATTGG ATGCCACGGC AATACAATGC TGGACGTCGG TGCAGCAGAA TTATGGCTGT AATGTGTGCA CGAGCATGAG CATTATGAGC GAGAACATGA TGCCGAGCGG CTGCGAGGTG GATGTGACGG GTACATTAAG TATGTATGCG CTGCAACTGG CTTCGGGCTC GCCGAGCGCG CTGGTGGATT GGAACAACAA TTACGCCAAC GACGATAACA AATGCGTGCT TTTCCACTGC GGTAACTGGG CGAAATCGTT TTTGCCGGAT ATCGAAATTG CGACGGCGCC GATCCTCGGC ACGTCGGTGG GAGAGGAGAA TACCTGGGGT GCACTGGCCG GTCGCACACC TGCGATGCCG CTCACATATG GGCGCATCAG CACGGACGAC CCGCGCGGCG TGATGAAGGC GTACATTGGC GAAGGCCGGC TCACGGACGA TACGCTGAAA ACCTTCGGTA ACCGTGCCGT GGCTGAGATC CCGAACCTGC AAAACCTGAT GAATTACATC TGCCGCAACG GTTTCGAACA CCATGTGGTG ATGAATGCGT CGAAAACGGC GGGTATTTTG AAAGAAGCGT TGGGCAATTA CATGGGCTGG GAAGTGCAGG TTTTTGACGA ACCCGCACAG CAACCTTACG CCACACGTTT GCCCGACCGC GAACTGGTTT CGCAGAACTA A
|
Protein sequence | MKSIGVIIGN RDFFPDRLVA EARVEIVDLL KKLNINEIML DTEATKLGGV ETFQDAQKCA ALFRAHRDEI MGVLVVLPNF GDERGIAETL KLADLNVPVL VQGYPDDLDK LDVARRRDSW CGKISACNNL YQFGIKYTLT TKHVVHPTDP SFIKDLNDFV AVCRVTKGLR NVRIGAIGAR PGGFNTVRYS EKILQRNGIS VVTVDLSEIL GNANKLTAQD SKVKERLDKI TSYASRGRTP DEALIQMAKL DVVLGDFIEA NALDATAIQC WTSVQQNYGC NVCTSMSIMS ENMMPSGCEV DVTGTLSMYA LQLASGSPSA LVDWNNNYAN DDNKCVLFHC GNWAKSFLPD IEIATAPILG TSVGEENTWG ALAGRTPAMP LTYGRISTDD PRGVMKAYIG EGRLTDDTLK TFGNRAVAEI PNLQNLMNYI CRNGFEHHVV MNASKTAGIL KEALGNYMGW EVQVFDEPAQ QPYATRLPDR ELVSQN
|
| |