Gene Dfer_2098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2098 
Symbol 
ID8225670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2560189 
End bp2561508 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content55% 
IMG OID644929935 
Productpeptidase U62 modulator of DNA gyrase 
Protein accessionYP_003086486 
Protein GI255035865 
COG category[R] General function prediction only 
COG ID[COG0312] Predicted Zn-dependent proteases and their inactivated homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTATAC TTTCAAAAGA ACAGGCTAAG AAAATCATAG ATAAGGTGCT GGCGTTTTCG 
AAGGCGGATG AGGTGAGTGT TTCGCTGTCC GGCGACCGCG TGGGTAATAT TCGTTATGCC
CGTAACTCGG TGTCGACCAG TGGTGAAACG ACCGATCTTT CGCTTTCTGT TACGGCTGTT
TTTGGCAAAA AATCAGGGAC TGCGACGATC AATGAGTTCG ATGATGCGTC GTTGGAAAAG
ACGGTCCGGC GGGCGGAAGA AATTGCGAAG CTGGCGCCGG ATAATCCCGA ATACATGCCT
ATGCTCGGCC CGCAGCAATA TATAGAAACA AAGGCATTTG CCGACAGCAC CGCGGGCATT
GACCCGCAAT ACCGCGCGAA GGCGGCTTTC GGAAGCATTG ACCCTTGCAT CCGGAAAAAC
CTCACTGCCG CCGGTTACAT GGAAGACAAC AGTGGTTTTT CGGCCCTGGG TAACAGCAAA
GGCCTGTTTG GGTACAATAA ATTCACTTCC GTCGACTTTT CGGTAACTGT GAGAACCGCC
GATGGCACCG GTTCGGGCTA TGTGGCGCGG GATTATAACG ATGTTTCCAA ACTCAACACG
CAGGTCGCGA CGGAAATAGC CATGCAAAAG GCGTTGGCGT CGGTGAATGC AAAGGCATTG
GAACCGGGCA AATACACGGT GATCCTCGAA CCTACGGCCG GTCACGACCT GATCCAGAAC
ATGATGCGCA GCATGGACGC GCGCAGCGCC GACGAAGGCC GGAGCTTTCT GGGCAAAAAG
GGCGGCGGTA CCCGCCTGGG TGAAAAACTG CTGGACGAGC GCGTCACCAT CTATTCCGAT
CCGGCCAACA GCGAAGTGCC CGGCTCGCCA TTTGCGGGCG GCGACGGTCG TCCGCAGGAA
AAAGTGACCT GGTTTGAAAA CGGCGTCGTC AAGAATATGT ACTACTCCCG TTTTTGGGCT
GACAAAAAAG GCGTGAAAGC CATTCCGTCG CCGGGCGGGA TCATCTTCCA GGGCGGCAAC
GACTCGCTGG CCGACCTGAT CAAAAGCACG GAAAAGGGCA TTCTCGTCAC CCGTTTCTGG
TATATCCGCA GCGTAGACCC GCAAACGCTG CTCTACACCG GCCTCACGCG CGACGGCACT
TTTTACATCG AGAACGGCCA GATCAAATAC CCGGTCAAAA ATTTCCGGTT CAATGAAAGC
CCGGTAATCA TGCTCAATAA CGTGGAGGCG ATCGGGAAAC CCGTGCGCAC GAACGGCAGC
CTGATTCCAC CTCTCAAAAT CCGCGATTTT ACGTTTACAA GCCTTTCGGA CGCAGTGTAG
 
Protein sequence
MAILSKEQAK KIIDKVLAFS KADEVSVSLS GDRVGNIRYA RNSVSTSGET TDLSLSVTAV 
FGKKSGTATI NEFDDASLEK TVRRAEEIAK LAPDNPEYMP MLGPQQYIET KAFADSTAGI
DPQYRAKAAF GSIDPCIRKN LTAAGYMEDN SGFSALGNSK GLFGYNKFTS VDFSVTVRTA
DGTGSGYVAR DYNDVSKLNT QVATEIAMQK ALASVNAKAL EPGKYTVILE PTAGHDLIQN
MMRSMDARSA DEGRSFLGKK GGGTRLGEKL LDERVTIYSD PANSEVPGSP FAGGDGRPQE
KVTWFENGVV KNMYYSRFWA DKKGVKAIPS PGGIIFQGGN DSLADLIKST EKGILVTRFW
YIRSVDPQTL LYTGLTRDGT FYIENGQIKY PVKNFRFNES PVIMLNNVEA IGKPVRTNGS
LIPPLKIRDF TFTSLSDAV