Gene Dfer_2028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2028 
Symbol 
ID8225600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2474088 
End bp2474909 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content53% 
IMG OID644929865 
Producttranscriptional regulator, XRE family 
Protein accessionYP_003086416 
Protein GI255035795 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGCGC AGGACATTTT CTGGTCGGTC AATATCAAGT TCCTCCGTTT GCGTCAGAAA 
CTTAGCCAGG AAGCGCTGGC GGAAAAGCTC GGGATCAGCA GGGTAAAGCT CAATGCGATC
GAAAGCGGCC GGACGGCCAA CCCGACGGTC GATGATCTGA TCAACTTCTC CGAGTATTTC
CGGATGAGTA TCGACAGCCT TCTTAAAATA GAACTGAGCA AGCTGTCGGA CCAGAAGCTG
AAAGACCTCG AAGAAGGAAG TGAGCTGTTC ATGAAAGGCG ACCAGATCCG CGTCCTGGCG
ATTACGGTGG ATAAGGAGGA CAAAGAGAAC ATCGAATACG TGCCCGTGCA GGCGCGGGCG
GGGTACCGCT CCGGTTATGC CGACCCTGAG TTCCTGGCCA CATTACCGCG CTTCAACTTG
CCTACCGTAC CCAAAAACGG CACTTTCCGC ATGTTCCCGA CTGTGGGCGA TTCCATGCTG
CCGGTGCCCG AAGGCGCGGA CATCATCACC CGGTACGTTC AGGACTGGAC AACCGTGAAG
CCTGAAACGC CCTGCATTGT GATCCTGAAA GGCGACCAGG ACTTCGTTTT CAAGCAGGTT
ACCATTAACC AGGAAGCCGG AACGATGCTT TTGCAATCGT TCAACAAGCA ATATTTTGCC
TACACCGTGC CCATCGGCGA AGTGATTGAG TTGTGGGAAT ATTACAGCTT CCACAGCAAG
GCGCTTCCGG AGCCACAGAC CGATATGCAG CAGCTCATGC GGATGTTGCA GGAAATGCAA
AACGAAATTC GCGAATTGAA GAAAAAGTCC ACCTATAAGT AA
 
Protein sequence
MGAQDIFWSV NIKFLRLRQK LSQEALAEKL GISRVKLNAI ESGRTANPTV DDLINFSEYF 
RMSIDSLLKI ELSKLSDQKL KDLEEGSELF MKGDQIRVLA ITVDKEDKEN IEYVPVQARA
GYRSGYADPE FLATLPRFNL PTVPKNGTFR MFPTVGDSML PVPEGADIIT RYVQDWTTVK
PETPCIVILK GDQDFVFKQV TINQEAGTML LQSFNKQYFA YTVPIGEVIE LWEYYSFHSK
ALPEPQTDMQ QLMRMLQEMQ NEIRELKKKS TYK