| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2024 |
|---|
| Symbol | |
|---|
| ID | 8225596 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 2468780 |
|---|
| End bp | 2469304 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 644929861 |
|---|
| Product | crossover junction endodeoxyribonuclease RuvC |
|---|
| Protein accession | YP_003086412 |
|---|
| Protein GI | 255035791 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0817] Holliday junction resolvasome, endonuclease subunit |
|---|
| TIGRFAM ID | [TIGR00228] crossover junction endodeoxyribonuclease RuvC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.270217 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTTATG GGGTTATTTC GGTCAAAGGA CAGCAAATTT CGCTGGTGCA GTACGGGGTG
ATTCATCTGA GCAAATATAG TACGCACGAG TTGAAGTTGA AGAAAATCTT TGAACGCCTC
ACCCAGCTGA TCGAGGATTA CCTGCCCGAC GAAATGGCGA TCGAAGATCC CTTTTATGGC
AAAAATGCGC AGTCGATGCT CAAACTCGGG CGCGCCCAGG GCGTAGCGAT GGCGGCCGCA
CTGGCGCGCA ACATCCCGAT CGTCGAGTAT TCTCCTAAAA AGGTGAAGCA ATCGGTCACC
GGCAGCGGCA ATGCTTCCAA AGAGCAGGTG GCCTACATGC TCGAAAAAAT CCTGAAAATG
GAGCTCAGCC GCGAGTTCAT GGATGCCACC GACGGCATCG CAATCGCGAT TTGCCATCAG
TACCATGCCA ATTCGCCGGC CTCTGTGGCG ACCGGCGGTT CTAAAAAAGC TAAAAAGGGC
GGCTGGGGTG CATTTGTAAG TGAAAACCCC AACCGCATAC GCTAA
|
|---|
| Protein sequence | MGYGVISVKG QQISLVQYGV IHLSKYSTHE LKLKKIFERL TQLIEDYLPD EMAIEDPFYG
KNAQSMLKLG RAQGVAMAAA LARNIPIVEY SPKKVKQSVT GSGNASKEQV AYMLEKILKM
ELSREFMDAT DGIAIAICHQ YHANSPASVA TGGSKKAKKG GWGAFVSENP NRIR
|
|---|
| |