| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1995 |
|---|
| Symbol | |
|---|
| ID | 8225567 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 2434205 |
|---|
| End bp | 2435071 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 644929832 |
|---|
| Product | lipid A biosynthesis acyltransferase |
|---|
| Protein accession | YP_003086383 |
|---|
| Protein GI | 255035762 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4261] Predicted acyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.834184 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGTT GGGACGGTAA GACCAAGGGA TCGTTAACGG GTTACAAGAT TTTCCTGTTT
TTTATCAATA GTTTGGGGCT CGGATTTGCA TATGGGCTCC TGCGCGTGGT TACTTACTAT
TATTATCTTT TCGCGGCAAA GCCCAAAAAG GCTTTGCTCG ATTTTTACCA GAACACCCTT
CACATCACCG GCCCGGAAGC CCGCAAAATG GCCCGCCGGA ATTTCTATAT TTTCGGGCAA
ACACTCGTGG ACCGGGCGGC GTTCCTGCTG GGCAAGGACC GGGAATTTTC TCATGTGTTT
GAAAATGAGC AATATCTGAT CGACATCCGC GATGCCGGCA GGGGCGGAAT TTTGCTGAGC
GCCCACGTAG GCAACTGGGA AACGGCCGGT AATCTGCTCA AAGGCCGCAT CACGCCTACG
ATCAACATCG TGATGCTCGA CGCCGAAGTC GAAAACATCA AAAAATACAT GGATCTGTCC
ACCGGCGGCT CGCGGTTCAA GGTGATCGCG ATCAAGGACG ATCTTTCACA TGTTATTTCA
ATTCGCAATG CGCTGGTGAA CAACGAGTTT GTGGCCATTC ACGCCGACCG CTACCTCGAA
GGCGCCAAAT ACATCGAAAT GGATTTCCTG GGGCGCAAGG CCAGGTTTCC GTACGGCCCG
TTTGTGATCG CATCCAAATT CAATGCGCCG GTGACCTTTG TTTTTGCTGC GAAGGACGGG
AAATACAGCT ATCATTTGAG CGCCACCAAG CCGATCGAGG CCAAAATGAA GCCCGAGGAA
ATTGCGAAAT TGTATGTGGA AGAGCTGGAA CGAAAGGTGA GGGCATTCCC GGAACAATGG
TTTAACTATT TCAATTTCTT TCAATAA
|
|---|
| Protein sequence | MSRWDGKTKG SLTGYKIFLF FINSLGLGFA YGLLRVVTYY YYLFAAKPKK ALLDFYQNTL
HITGPEARKM ARRNFYIFGQ TLVDRAAFLL GKDREFSHVF ENEQYLIDIR DAGRGGILLS
AHVGNWETAG NLLKGRITPT INIVMLDAEV ENIKKYMDLS TGGSRFKVIA IKDDLSHVIS
IRNALVNNEF VAIHADRYLE GAKYIEMDFL GRKARFPYGP FVIASKFNAP VTFVFAAKDG
KYSYHLSATK PIEAKMKPEE IAKLYVEELE RKVRAFPEQW FNYFNFFQ
|
|---|
| |