| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1944 |
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| Symbol | |
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| ID | 8225515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 2377998 |
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| End bp | 2381834 |
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| Gene Length | 3837 bp |
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| Protein Length | 1278 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644929782 |
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| Product | histidine kinase |
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| Protein accession | YP_003086334 |
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| Protein GI | 255035713 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.866742 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGTTTG GCACAGAAAG GGAGCTTTAC CGGTATGATT CTAAGACTTT TAAGAAATAC
AAACACAATC CTAAAGACCC TCGTTCGATC GCGTCCGATT ACGTACACAA AATATATCAG
GATTCGAAAG GAAATTTGTG GATGGCAGCC GGGAATAATG GACTATGCCT GTACAACCGT
GAAAGCGATT CTTTTACCAC ATTCCGGCAC GATCGGAATG ACTCCGGTTC ACTAACAGAC
AACAATGTAA AGGGACTGGT CGAAGACAAC AAAAACAATT TGTGGGTAGC GACCGCTTTG
GGACTCAACA GGATCATTTT TGAGGGCGCT TCTGTCAAAA TAGCGCGTCA GGCAACTAAT
ATCCCGTACC ATATCGAATG TATTGTTGCT GGCCAGAATG GAGAGTTGTG GCTTGGAACA
ACGAATGGCC TGTTCAAGTT TAAAGCTGGT AAAACCAGCC CAGTCGGGCA AAAGATCTTA
ACCAGCGGAA CTGCTTCATA TTCTATATAC AGCATGCACC TGGACAAGAA AGGTAACCTT
TGGCTGGGCA CGAGCCACGG TTTGGTAAAA TACAATACAG CAACCGAATC GTATTATCCA
GTAGCAAGTG TGAAGCGGAA TAGCTTGCTG CCGGCGATAT ATGGGATTGC AGAAGATCAC
AACAATAAAT TATGGTTGGC CAGTGAGTCG GGTCTTGCTT TTTTTGACCA GGAAACCTCT
CGTGTAAAAT GGCACCTGAG GGATAAGACT AATCCCAATG CCCTTGTTGA TGACGCGTTA
ATGAGTATAC ACATTGATCA ACAACGAGGG CTTTGGGTCG GCGCGTACTA TCAGGGAATC
AGCTATATGA ACACCAACCT CCCTGATTTT TCGCTTTGGC CGGCCTCATA CGAGGACAAA
TTATCCGATT TCTACCTGGC AGCAAAGATT GGCAAAACCC CGAAAGGAAA GCTTTGGGCT
ATTTCTGTTA ATTATGACCG GATTTGGATA TCCGGTCCAG GCAACACCGA AGGTGTGTCT
ACAAGGGTAA AACTTCCTGC TGGCGAAAAG TATTACGCTT TCTTTTTGGA TGATTCGGGT
ACCTTATGGT GTGGTGGAAA CAACTGTTTG TTTATTAAAT ATGACTTAAA AACCGGAAAA
GTGCTAAGAT ATTCCCCTAA CCAGGTTTAT CAAGGAACGC CTCTTCCGGA TACTAAAATT
TTGATGTTAT ATCCAGACAA GAAAGGCAGG ATATGGATAA GTGGTTGGCT CGGTCTGATA
TGTTTTAATC CCCACACGGG TCGGTTCCAG CGTATTGAAG GCACCAAGAG TATCCATTCG
ATTCTGGAAG ATTCCAAAGG CAATCTGTGG TTTTCCGGCG AGTTTAATAT TTACTTATTG
GAATCCAATT CTTCCAAGAT CAGCGTTGTA AAAGTCAGCG CACTTGCAGA GACCGGGAAC
CAATTGTATG CCGGTCGGAT CGCAGAAGAT GATTCCGGGA GGATCTGGGC TACCAGCAAT
AATGGGCTGC TTCTTTATGA CAATAAAAAC CGCACATTTT TGCCTCATAC CAATGATTCC
CCGGAATTGC TAAATTATGT CCAGGGTTTA CAAATCGATT CCAGAGGCAA TTTATGGCTT
TGCAATGAAA ATAAGCTGAT CTGCTATCAT CCCGAAAAAA AAAGTGTTAA AGTATACGAT
TACCGGGATG GGCTTCCTTA TGGAGGGTTT CTATTGGATA ATGCGTCATT GAAAGACAAT
CAAGGCAACT TGTATTTCCC CACAAGCGAA GGAACTTTCA GGTTTAACCC TGACAAGATC
ACTGACGACA CGACTGCGGC GCCACTTACT TTAACATCAC TGAAATTGTT CAATAAGGAG
GTAAGGCCTG GTGATCGGAC CGCCCTTTTA GACCATGCTG TTGAAATGAC CAAGGAGATT
ATTTTCCGGC ATGATCAGAA CATTTTTACG CTCGACTTTG CTTTACTGAA CAATGCCCGG
TCGGAGAGGA ATCAATACGC CTATTTTCTT GAAAATTTTG AACATCAGTG GAACTACGTT
CAATCACCCA GCGCGACCTA TACGAACCTC CCACCAGGTA CCTACATGTT TCTTGCCAAA
GCAGCTAATG GGGACGGTTT CTGGAACCCA AAACCACTTC GATTAAAAAT TACCATTTTG
CCCCCTTGGT GGAAGACCTG GTACGCCTAC CTGTGTTATA TGTTGCTGAT CGCGACGGGA
GTATACGCTA TAACGAGATA TTTCTGGCTC CGGAGCTCAT TGAGAAGGGA GACCGCCCTA
AACCAGATTA AACTTGATTT TTTCACCAAT GTATCCCACG AGATCAGAAC GCACCTTTCG
CTGATCTCTG CGCCATTAGA AAAGGCATTC CAGCATGCGA AGGAAGGCAA GAGTAATGAG
AGTTTCCTGA ACTATGCCAA AAGTAATTCT GATCGGTTGC TGCTGCTCGT GAATGAGCTG
CTCGATTTTC GCAAAATCCA GAGCGGCAAT CTCCGTCTAT TGGTTGGGGA GCATGATATA
GTCAAGGTCA TCAAAAGCGT GACCGCCGCA TTTGAGCACA TTTCGAAAGA AAAGGATATT
CAAACTCTGC TATTTTACCC CGACAGGCCT GTGCTGCTCT GGTTTGATAT CGCCCAAATG
CAGAAAGTGT TTTACAACCT GCTCAGCAAT GCCTACAAGT TCACGCCTGA GGGCGGCAAA
GTCCAGGTGC GTATAGCTGA GACTTACGGC GAGGTGCTTA TTTCGGTTGA AGACAATGGC
AAGGGGATTT CGCCTGACCA CCTTCGAAAG CTGTTTACTT ATTACTATCA GGTGGGGGCC
GACAAACCAG GTTATGGAAT AGGCCTGGCG CTGTCCAAGA GTATTGTTCA GCAGCATTAT
GGCTACCTGA CGGCAGAAAG CCGGCTCGCG TCAGCGTCCG AACCCGGAGG GACCACACTT
AACATACGCA TGCTACGCGG GAACAGTCAT TTTCCCCCGG ATCAGATCGC CATGCAAGCG
CGCGATTATG TCGCCGGCAT GCTGGCGGAA CCGGTTGCCA CGGCTATCAA CGCGGGTGCT
GCACATTCAG GTCAAAAAAA CACCATCTTG ATTATTGAGG ACAACGACCA GCTGCGCGTG
TTTATCAGGG AATTGTTTGA GGAAACCTAC AATATATTGG AAGCCGGAAA CGGTCTGCGG
GGCGTTGAAC TTGCCCAGGA AAAAATTCCT GACATCATTC TTTCCGACGT GATGATGCCC
GAAATAAGCG GGCTGGAAGT TTGCAATCGG CTGAAAAAAA GCGATACTAC TTCTCATATC
CCGGTGGTGC TGCTCACCGC AAGAACGCAG AGCGAGCAAG TCATCGAAGG CCTTACGGCT
GGTGCAGACG ACTACCTTGT CAAACCGTTT GACCCACGGA TTCTCGAGAT CAAGATCAAC
AATTTACTCC GTGTTCGGGA GCAGATGAAA GCCCGCTATC GTCATTCGCT GTTCGTGGAA
GAAGCAGGGC ACAATATAGC CCAGGATCTG AATGAAGCAT TCATTAACAA ATTGAGGGCG
CTGGTGATAG AAAACATTTC CGATGCTGGG TTCGGCGTCC ATCAACTTGC CTTTCATGCC
GGGATGAGCG TATCTGTACT CTACCGGAAA ATGCGGTCGC TGACAGGAAT GACAGTCAAC
GAATTTGTAA AAACCATTCG CTTAAACAAA GCAAAAACGC TGCTGGAGTC GGGAGCATAT
CAGGTGAGCG AAGTGGCGAC GATCATCGGC TTCGAGGATG TCAAATATTT CAGCAAGGAG
TTTACCAAAG TGTTTGGCAG AAAGCCCAAT GAGATAAAAA AACAAATGTA CGGCTAG
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| Protein sequence | MWFGTERELY RYDSKTFKKY KHNPKDPRSI ASDYVHKIYQ DSKGNLWMAA GNNGLCLYNR
ESDSFTTFRH DRNDSGSLTD NNVKGLVEDN KNNLWVATAL GLNRIIFEGA SVKIARQATN
IPYHIECIVA GQNGELWLGT TNGLFKFKAG KTSPVGQKIL TSGTASYSIY SMHLDKKGNL
WLGTSHGLVK YNTATESYYP VASVKRNSLL PAIYGIAEDH NNKLWLASES GLAFFDQETS
RVKWHLRDKT NPNALVDDAL MSIHIDQQRG LWVGAYYQGI SYMNTNLPDF SLWPASYEDK
LSDFYLAAKI GKTPKGKLWA ISVNYDRIWI SGPGNTEGVS TRVKLPAGEK YYAFFLDDSG
TLWCGGNNCL FIKYDLKTGK VLRYSPNQVY QGTPLPDTKI LMLYPDKKGR IWISGWLGLI
CFNPHTGRFQ RIEGTKSIHS ILEDSKGNLW FSGEFNIYLL ESNSSKISVV KVSALAETGN
QLYAGRIAED DSGRIWATSN NGLLLYDNKN RTFLPHTNDS PELLNYVQGL QIDSRGNLWL
CNENKLICYH PEKKSVKVYD YRDGLPYGGF LLDNASLKDN QGNLYFPTSE GTFRFNPDKI
TDDTTAAPLT LTSLKLFNKE VRPGDRTALL DHAVEMTKEI IFRHDQNIFT LDFALLNNAR
SERNQYAYFL ENFEHQWNYV QSPSATYTNL PPGTYMFLAK AANGDGFWNP KPLRLKITIL
PPWWKTWYAY LCYMLLIATG VYAITRYFWL RSSLRRETAL NQIKLDFFTN VSHEIRTHLS
LISAPLEKAF QHAKEGKSNE SFLNYAKSNS DRLLLLVNEL LDFRKIQSGN LRLLVGEHDI
VKVIKSVTAA FEHISKEKDI QTLLFYPDRP VLLWFDIAQM QKVFYNLLSN AYKFTPEGGK
VQVRIAETYG EVLISVEDNG KGISPDHLRK LFTYYYQVGA DKPGYGIGLA LSKSIVQQHY
GYLTAESRLA SASEPGGTTL NIRMLRGNSH FPPDQIAMQA RDYVAGMLAE PVATAINAGA
AHSGQKNTIL IIEDNDQLRV FIRELFEETY NILEAGNGLR GVELAQEKIP DIILSDVMMP
EISGLEVCNR LKKSDTTSHI PVVLLTARTQ SEQVIEGLTA GADDYLVKPF DPRILEIKIN
NLLRVREQMK ARYRHSLFVE EAGHNIAQDL NEAFINKLRA LVIENISDAG FGVHQLAFHA
GMSVSVLYRK MRSLTGMTVN EFVKTIRLNK AKTLLESGAY QVSEVATIIG FEDVKYFSKE
FTKVFGRKPN EIKKQMYG
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