Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_1937 |
Symbol | |
ID | 8225508 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 2368696 |
End bp | 2369487 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644929775 |
Product | carbohydrate-binding family 6 protein |
Protein accession | YP_003086327 |
Protein GI | 255035706 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.214257 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGCTGC TCGCTTTTCT TCTTGTCCCA GTATTGACAT TTGGACAATT ACCGCAGGGC TTCACACAAA AGAAGCTCAC GCAGGACGTT ATCAACGAGG CTACTTGCAT GGCCCATGCC GCCGACGGCC GGATTTTCGT TGCCGAACGG TCGGGTAGCG TGAAGGTTTT CCAGAATGGT TTGCTATCAA CCGTTCACCA GGTACAGACA ACGACCGACG CCGAACAAGG ACTGTTGGGG ATTACTCTGC ATCCTGATTT TGCCGCAAAT GGTAAATGCT ATCTTTTTTA CACGAATCAG CAGCGTAGCA GGCATTATCT GGATGTGATT GGCATCACGC CTGCAAATAC AGTAAATTCG GTCACCCGGG TCATGCAGTT CGATTCAATC CTGAATGGAA ATCATAACGG CGGTGCCCTG CTTTTCAAAG ACGGTTATCT CTATATAGCG ATCGGCGACA GCAACCGTCC CGTGTTTGCA CCTCAGCTCG ACACGTACAG GGGAAAAATC CTCTGGTTGC TCGACAATGG TGAGCCGGCA CCCGGCAATC CCTATTACAA TCAACCCGGC GCTTCACGTC AGAGAAGGAG CATTTGGGCA GTAGGTTTCC GGAATCCGTG GCGAATGAGC CTGGATCCTG TTTCAAAAAA GCTTTTCCTC ATCGATGTAG GCGAACATTT TGAAGAAATC AACGATATCA CCGCTCCGGC AGCATCAAAA AACTATGATT ATGGCTGGAA TTGTAAGTAT CCCGAAACGA CAGACAGTTT GAAATTAGAG ATTAAACCTT AA
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Protein sequence | MGLLAFLLVP VLTFGQLPQG FTQKKLTQDV INEATCMAHA ADGRIFVAER SGSVKVFQNG LLSTVHQVQT TTDAEQGLLG ITLHPDFAAN GKCYLFYTNQ QRSRHYLDVI GITPANTVNS VTRVMQFDSI LNGNHNGGAL LFKDGYLYIA IGDSNRPVFA PQLDTYRGKI LWLLDNGEPA PGNPYYNQPG ASRQRRSIWA VGFRNPWRMS LDPVSKKLFL IDVGEHFEEI NDITAPAASK NYDYGWNCKY PETTDSLKLE IKP
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