Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_1903 |
Symbol | |
ID | 8225474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 2339555 |
End bp | 2340319 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644929750 |
Product | Phytanoyl-CoA dioxygenase |
Protein accession | YP_003086302 |
Protein GI | 255035681 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG5285] Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.825715 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTTTG GATTGATCAA AAGAAAATTT GAGGAAGATG GCTATGTTTT TTTGCCCGGA TTCCTTTCAG ATCGGGAAGT GGCGGAAGTG AACCGCAGAC TGGAAGATTT TATTGAAAAC ACGGTTCCCG GACTTCCTCC GAACGATGTC TTTTATGAAG ATAAGAACGA TCCCGCCACG TTAAAGCAGA TTATGCACGT GTCTGAACAC GCGCCCTATT TCGCGCCTAT GCTGAATGAC AGTAAGTTCA GCAGGATCGC AGGGGAGCTG CTGCAAGACA CCGTAGTGCC GAAGATTCTG GAGTATTTTA ACAAACCCCC GAAAATTGGA AAGCCTACCC CTCCGCACCA GGACGGCTAC TACTTCATGC TCAAACCCGC CAAGGCGGTG ACGATGTGGA TGGCGCTGGA AGACGTGGAC GAGGCCAACG GATGTGTGCG TTACGTACGG GGATCTCATA AATTGGGAAT GCGCCGGCAC GGAAGAACAC AAACCCTCGG TTTCTCACAG GGAATCACGG ATTTCGGCTT GCCGGAGGAT CTTGAAAATG AGATCGCATT CCCCGCCAGA GCGGGCGACC TGCTGATCCA TGACTCGCTG ACCATCCACC GCGCCGACGG GAATCAGACT GCCGACCGTA CACGGAAGGC GCTGGGGTTT ATCTATTTCG GTGCGTCGGC GCAGGAAGAC GTAGAGGCCA AAGCGGCCTA TCAGGCACAA TTGCGGCAGG AAATGCGCGA AAGAGACGAG TTGGTGGCAG AGTGA
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Protein sequence | MDFGLIKRKF EEDGYVFLPG FLSDREVAEV NRRLEDFIEN TVPGLPPNDV FYEDKNDPAT LKQIMHVSEH APYFAPMLND SKFSRIAGEL LQDTVVPKIL EYFNKPPKIG KPTPPHQDGY YFMLKPAKAV TMWMALEDVD EANGCVRYVR GSHKLGMRRH GRTQTLGFSQ GITDFGLPED LENEIAFPAR AGDLLIHDSL TIHRADGNQT ADRTRKALGF IYFGASAQED VEAKAAYQAQ LRQEMRERDE LVAE
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