| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1845 |
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| Symbol | |
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| ID | 8225416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 2270146 |
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| End bp | 2273532 |
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| Gene Length | 3387 bp |
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| Protein Length | 1128 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644929695 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003086247 |
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| Protein GI | 255035626 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.430799 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAGTCA GCCTCATACA ACTATTCGTG ATCGGCCTGT TCACAAACCT TTCCCTGGCC
GGGCCGACCC GGGCGCAGGA GGTGCTCAGC CGGCGGATAA GCCTGAGCAT CAATGAACAA
AAAGTAGAGA CCGTGCTGGG TATCCTGACC AGGCAAACAG GCGTGCGCTT CATGTATATT
CCTGAACTGA TCCAGTCGAC CCGCACCGTT ACCGTCAGTG TGAAAGAAGA AACTTTGGGA
AATGTCCTGA ATAAGCTGCT GACGCCCCTG CAAATTAACT ACCAGGTCAC CAGCCGTAAC
CAGATCTTGC TCAAAAGAAT GCCGAAACAG TCGCTTTTCG AACATTTGTT TCCCTCTGTG
ACTGAAAAAG AGTCGATCGT AGCATTTACC GTATCGGGCA AAGTGGTAGA CCATGCCGGT
GGCGCCATTC CTGGTGCGAC CGTGCTGCTC AAAGGTACGA CCAACACGGG CACGTCCACC
AACGAAAAGG GCGAGTTTAC GCTTTCGCTG CCCGACAGTG CCCGCGCATT GGTGGTATCC
TCCATTGGTT TTTTGACGCA GGAGGTAATG CTCAACAACC GTACTTATAT CGAGGTAAAG
CTGGCGGCCG ACGTACAGGC GCTGGATGCG GTGATGGTAG TGGGTTACGG CACGACTTCA
ATCCGCAAGA ATACGGCGGC CGTAGCAAAG GTGGAAACCG AAAAACTTGA AAACCTGCCA
TTGACCAGCA TTGCCGACGG ACTTGCGGGC AGGGCTCCCG GCCTGATCGT GTCGACCAGC
GGCGCAGGTC CCGGTGTGAA ACCGACGATT TCGATCCGTG GTGGCAACCA GCCATTGTTT
GTGATCGATG GTGTGATTTC AACCCAGCTG GATTTCAATA ATATCAATTC CAATGATATC
GAGAGTTTCC AGGTGCTGAA AGACGCTGCC GCGACGGCTG TGTATGGTAC GCGTGGCGGT
AATGGCGTCA TTCTCATTAC GACGAAACGT GGAAAAGCAG GAGAGTCGGT GATCCGCTAC
GACTACAATT ATGACCTTTC GCAGCCGACT TATCTTCCTC AGAAATTAAG CTCGTTCGAA
CGTGCGCTTA TTTCAAATGA AGCCAAGATC AACGATGGCC TGCCGCCGGA TTATTCCGAA
GAAGTGCTGG CTAAATTCCG CGACCAAACC GACCCTGTCA ACTACCCGAA CACCGACTGG
CAAAAACTTG CACTCAAACG TTTCGCGCCT CAAATGAGGC ACAACATCTC GCTTTCCGGC
GGAACCGAGC GCACCCAGTA CTTCGCATCT TTGGGCTATT TCGACCAGGG GACGTTGTAT
ACGCAGAAAA CCAACTGGCT GAAACGGTAC AATTACCGGA TCAATATGAC CAACAATTTT
GACAAGATCG GCCTTAAAGC GGAGATCAAC CTCAGTGGGG CCATTGAGAA GCTGAATCAG
CCTGCCTCGC AATACGGATC GGGCTACTAT TACATCTGGG GCCACATTCA GAACAAGAGT
CCAATGACCC CCGCCTTTAA TGACAAGGGC AAATATGCCA ACTCGGGCGA CCATCCGCTG
GTGGAAATGG ACCCGCGCTC GGGCTACGAC CGGTCTACCG ACAAGTTTGT GAATGGAAAT
ATGATGCTGA GCTGGGCCGT TCCTGGCGTA AAAGGGCTAT CGGTGAAGGC ATTGGGTAAT
TACCGCATGG GTAATTTCTG GGAGAAAATG TGGACGCAGA CAGCGCCGCA ATATGCGATC
GGCAGCGATG TAGCAGCGAT TGCCAATAAG CCGAACCTTT TTACCAATGC TCAGGACAAC
TGGTCGTACA GCCTGCAAGG CCATATTAAT TACGAGACGA TCATTGCGAA GCACCACAAC
GTGAGTGCAG CGGTCATTTA TGAGGAAAGT TACTCGTATG GCGAAAATTT CAATGCGACG
CGCCGCAATT ACCAGCTCCC GGTGGACCAG CTCGCTTCCG GTCCGACTGA AAATATGGAA
AACAACGGCT CGGCAGCGGA ATCTGCCCGC GCGGGCTATG TAGGCAGGCT TCGCTATGAC
TATAAAGGCA AGTATATGCT CGAAGGCAAC TTCCGCTACG ACGGCAACGA CAATTTCCCG
AAAGGCAACC GCTGGGGATT CTTTCCGTCG ATTTCGGCGG GCTGGACCGT CTCGGACGAA
GGATTTTTCC AGCCTGTCGC GGATAAAAAC ATTCTCAGCT ATCTGAAAAT CAGGGGCTCG
ATTGGTTCGG TAGCGCAGGA TGGATCGGCG GGTACGGTGG CATCCAACCT CGAAATACCC
CGCTATGGTT ACCTGCCCGG GTATTCGCTC AATCAGCGGA CTTATATGGT GGGCGGCGTG
CTGGTGCCGG GTTTTAGCGA AGGCGCATTG CCCAGCCCAG ATATCACCTG GTACACGCAG
AATTCGCGAA ACATCGGTTT GGAGTTCACG ACGCTATCAG GCAAACTGAA TGGCTCTTTC
GACTACTTCT ACATCCGCAC GACGGGGTAC CTCGCCAGCC CGTCCGGCAC AAAATACTCA
GACCCGCTCG GGACGGCGTT GCCGACCGTG AAAACCAATG GGGCACACCG CCGCGCAGGT
TTCGAGTTCA GCCTGAATTA CCGCAACAAT ATCGGAGAAC TGCGTTACAG TGTCGGTGGT
AATTTGTCCA AATACGACCA ACTGTGGGAA GTGAACCCAA CCGAGGACGA GGCGACATTG
AAAAACCCGG ACAGCCGCAC CACGCACCAG AAGGATTATT GGGGCCGCGG ATACATTGCC
GAAGGTTTTT ACCAGACACA TGAAGAAATT CTGAACAGCC CGAAAAGGGC CGGATCGGTA
AACCTCGCGC CCGGTGATAT CCGCTACCGC GATGTGAATG GCGACGGCCA GCTCGATGCC
GCCGACCAGG TGCGGATTGG GAAGCAAATT GTGCCTCACA TCATGTACGG TGTCAATCTC
GACCTGCAAT ACAAAGGTTT TTTTCTCAAC TCGTTGTTCC AGGGGGCCGG CGACCGCAGC
GTGTACGTAG GTGATGTGAT CCGCCAGCAG GTGACCTACG AATTTCAGAA AGATTACTGG
ACGCCCGAAA ACCGCAATGC AACCTACCCG CGCCTGGTCA GTTCTTCGGG AATTAATGGG
GATAACAACT ATGTAACGTC GACATTCTGG CTTGCTAATG GCAGGTATGT AAGGTTGAAA
ACGTTGCAGC TTGGCTACGA CGTAAAATCC GGTTTGCTGA GTCGTGCCAG CTTCATCCGG
ACACTGCGTA TATCCCTTAC CGCACAAAAC CTGCTGACTG TTTCTCCGCT CAGAAAATTC
TATATGGACC CCGAGTCCGG CAGCGACAAC AATTATGCAT ACCCGATCCA GCGGACCTTT
TCATTGGGTG TAAATGTGGC ATTCTAA
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| Protein sequence | MRVSLIQLFV IGLFTNLSLA GPTRAQEVLS RRISLSINEQ KVETVLGILT RQTGVRFMYI
PELIQSTRTV TVSVKEETLG NVLNKLLTPL QINYQVTSRN QILLKRMPKQ SLFEHLFPSV
TEKESIVAFT VSGKVVDHAG GAIPGATVLL KGTTNTGTST NEKGEFTLSL PDSARALVVS
SIGFLTQEVM LNNRTYIEVK LAADVQALDA VMVVGYGTTS IRKNTAAVAK VETEKLENLP
LTSIADGLAG RAPGLIVSTS GAGPGVKPTI SIRGGNQPLF VIDGVISTQL DFNNINSNDI
ESFQVLKDAA ATAVYGTRGG NGVILITTKR GKAGESVIRY DYNYDLSQPT YLPQKLSSFE
RALISNEAKI NDGLPPDYSE EVLAKFRDQT DPVNYPNTDW QKLALKRFAP QMRHNISLSG
GTERTQYFAS LGYFDQGTLY TQKTNWLKRY NYRINMTNNF DKIGLKAEIN LSGAIEKLNQ
PASQYGSGYY YIWGHIQNKS PMTPAFNDKG KYANSGDHPL VEMDPRSGYD RSTDKFVNGN
MMLSWAVPGV KGLSVKALGN YRMGNFWEKM WTQTAPQYAI GSDVAAIANK PNLFTNAQDN
WSYSLQGHIN YETIIAKHHN VSAAVIYEES YSYGENFNAT RRNYQLPVDQ LASGPTENME
NNGSAAESAR AGYVGRLRYD YKGKYMLEGN FRYDGNDNFP KGNRWGFFPS ISAGWTVSDE
GFFQPVADKN ILSYLKIRGS IGSVAQDGSA GTVASNLEIP RYGYLPGYSL NQRTYMVGGV
LVPGFSEGAL PSPDITWYTQ NSRNIGLEFT TLSGKLNGSF DYFYIRTTGY LASPSGTKYS
DPLGTALPTV KTNGAHRRAG FEFSLNYRNN IGELRYSVGG NLSKYDQLWE VNPTEDEATL
KNPDSRTTHQ KDYWGRGYIA EGFYQTHEEI LNSPKRAGSV NLAPGDIRYR DVNGDGQLDA
ADQVRIGKQI VPHIMYGVNL DLQYKGFFLN SLFQGAGDRS VYVGDVIRQQ VTYEFQKDYW
TPENRNATYP RLVSSSGING DNNYVTSTFW LANGRYVRLK TLQLGYDVKS GLLSRASFIR
TLRISLTAQN LLTVSPLRKF YMDPESGSDN NYAYPIQRTF SLGVNVAF
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