| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1725 |
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| Symbol | |
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| ID | 8225296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 2104564 |
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| End bp | 2106840 |
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| Gene Length | 2277 bp |
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| Protein Length | 758 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644929579 |
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| Product | Glycoside hydrolase, family 20, catalytic core |
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| Protein accession | YP_003086131 |
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| Protein GI | 255035510 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3525] N-acetyl-beta-hexosaminidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACCGGA GCATTTTTCT GCTCAGTTTC TGCTGCCTCA TTATCTGGCC CGGAGCGCAC
GCGCAAGTCC GGAGTTCGCA AAAATCGGTA GCCGCGGAAA GCCAGGCCGG CGCGGGGCTC
CTGCCACTTC CCCAGCAAAT GCAGCTCACG GCCAAGCGGT TTTCCATGGG CACAAACTGG
CATATCGCGG CCGATCCGGC GCTCGCCGGC GAGCAGGCGG TGATGAGCTT GCAGCAGGGA
TTGAAAGAGG TAAATCTGGC GCTTAATGTG ACCGGAGCAA AGGGCAAGTC TCCCGCCATT
CAGCTTATCG TGCAAAACGG CTCGGTCGAG ATCGGCGCTA GTGTGGATAC CAACCGCGCC
GCGCTTACCC GCCAGGCTTA CCGGCTGAGC TTGAAACCCG GGCAGGTGAC CATCACGGCC
AATGCGCAGC AGGGCTTGTA TTATGGTGTC CAAACTTTTT TACAGTTGGT CAAAGCCGGC
CCGCAACTGC CTGAAGGCGA GATTACCGAC TGGCCCAATG TGGAGGTGAG GATGATTTAT
TGGGATGATG CGCACCATCT TGAAAAGCTG ACTGCATTGA AACGGATCAT CAGGCAGGCA
TCTACGTACA AAATCAATGC GTTTTCCATC AAACTCGAAG GGCATTTCGA ATACAAATCC
GCCCCGGCGA TTGTAGAACC TTATGCGCTG ACAGCCAAAG AATATCAGGA ACTCACAGAC
TTTGCCAAAG CACACTTTAT CGACCTCGTG CCGTTCCTCG ACGCCCCGGC GCACGTATCG
TTCATCCTGA AACACCCCGA ATTCCGGAAA CTGCGGCTGA TCGACGACAT CAATTACCAG
TTCTCGGTCA CAAATCCGGC CACGTTCAAG CTCCTGGACG CCATGTACAG CGAGTTGATC
AATGCGAGCA AAGGCAGCAA ATACATTCTC CTTTCCAACG ACGAAGCCTA CTACACCGGC
AAAGCACCAT CCGAAAAGGC GATGGCCGAC AGTCTCGGAG GCAACGGGCG TTTGCTGGCA
TGGTTTATGA AAAAACTGGC CGACAGGCTC CACGAGCAGG GTCGCACGGT GCTTTTCTGG
GGCGAATTCC CTTTGCGCAA AGAGGACATT ACCGCGCTGC CTTCACATAT GGTTAATGGG
GTTTATAACA AATCCATCGC GGCCGACTAT AAAAAGCATG GCATCCGGCA GTTCGTATAC
ACCGCCACGC AGGGCGCCGA GCCCATTTTT CCCAACTACT ACCCGAAACA CACTAAAACC
GCCATCATGG CCGACGGCAG CGACCGCTCC TCGGGGCGGG TGGCGGATAT GTTCCGGGAA
ATCGGGACGG CATTCTCGGG CAATCTGTCA TCGTTTATGG GCGTGATCAT CGCAGGCTGG
GCCGATGCGG GGCTGCATCC CGAAACGTTC TGGCTGGGCT ATGCCACGGG CACGGCGGCC
GGTTGGAATA ATAAAAATCT CACCCCTGCC AATGCTTCCG CACGGTTTAT GAATTCATTT
TACGGGCCCA GGCAAAAGGA TATGGACAGC GTTTACCGCG TCCTGAGCGA GCAAGCCGAG
TTCCATACCG AGAGCTGGGA TTGGATTCCA TCGCCCTGGC GCGCGCCCAT CAAAGGAAAT
TCCGACAGCC TGTTCCTACA ACCGGAAAAA GACCAGACCT TGCCCCTATT GCCCTTACCG
GCATCCAGCA CGCTGGCCGT TAGCAACAAA ACTTACCCGG TGAATGCCAA ACGCTTTGCC
ACGGCGCAGT CTATGCTGCC GCGCAATGCC TATGCGCTCC AACTGCTCCG GGAGAATAAA
TCGCTTGCCA AAACCCAGCT TTACAACCTG GAAGTACTCG AATCGGTGGC GGCGATTTGC
GGACAGAACC TCCGCATGCT CGTCGCATTG AACCGGATTT CGGATTTAGT GCAGGAAGCT
TCCGCCGCGA CCGCCGATCC GAAGCTGGCC GTCAGCAAAC TGGATGCGGC GATGGAAATG
GTGGGCAAGC TGAAAAACCA GCGCGACAGC ACGTTTGCAT TTGTCGAAAG CATTTGGTTC
AAAGAATGGC AGCCGCTGGT GGAAAAAGCC AATGGGAGGA CATTTTTACA CCAGGTCGAC
GACATCAAAG ACCACCAGCC CGTGCGCACG ATCGACCTCA GCTACCTCAT TTACCGTGAG
CTTCACTACC CGCTCGATCA ATGGTGGAAC GATGTGCTGA AAGTGCGGAA CGACTTCGCA
CAGCAGCATA ACCTCCCGCT GGTGAACAAG CAGCTCGAAT GGGCGCGGTA CAGGTGA
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| Protein sequence | MYRSIFLLSF CCLIIWPGAH AQVRSSQKSV AAESQAGAGL LPLPQQMQLT AKRFSMGTNW
HIAADPALAG EQAVMSLQQG LKEVNLALNV TGAKGKSPAI QLIVQNGSVE IGASVDTNRA
ALTRQAYRLS LKPGQVTITA NAQQGLYYGV QTFLQLVKAG PQLPEGEITD WPNVEVRMIY
WDDAHHLEKL TALKRIIRQA STYKINAFSI KLEGHFEYKS APAIVEPYAL TAKEYQELTD
FAKAHFIDLV PFLDAPAHVS FILKHPEFRK LRLIDDINYQ FSVTNPATFK LLDAMYSELI
NASKGSKYIL LSNDEAYYTG KAPSEKAMAD SLGGNGRLLA WFMKKLADRL HEQGRTVLFW
GEFPLRKEDI TALPSHMVNG VYNKSIAADY KKHGIRQFVY TATQGAEPIF PNYYPKHTKT
AIMADGSDRS SGRVADMFRE IGTAFSGNLS SFMGVIIAGW ADAGLHPETF WLGYATGTAA
GWNNKNLTPA NASARFMNSF YGPRQKDMDS VYRVLSEQAE FHTESWDWIP SPWRAPIKGN
SDSLFLQPEK DQTLPLLPLP ASSTLAVSNK TYPVNAKRFA TAQSMLPRNA YALQLLRENK
SLAKTQLYNL EVLESVAAIC GQNLRMLVAL NRISDLVQEA SAATADPKLA VSKLDAAMEM
VGKLKNQRDS TFAFVESIWF KEWQPLVEKA NGRTFLHQVD DIKDHQPVRT IDLSYLIYRE
LHYPLDQWWN DVLKVRNDFA QQHNLPLVNK QLEWARYR
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