| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1628 |
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| Symbol | |
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| ID | 8225199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 1972730 |
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| End bp | 1975192 |
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| Gene Length | 2463 bp |
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| Protein Length | 820 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644929483 |
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| Product | peptidase C1A papain |
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| Protein accession | YP_003086035 |
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| Protein GI | 255035414 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4870] Cysteine protease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.305041 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCGGG TTTCATCCGG TAGCCGCGCG GATACATTTT TATTTGTCGC AGTTTTGAAA
TACAAAGCCG CTCCGCGTTC GGCCGAAGAT TTTCGTAATA ACATCCTCTA TCAGTTCTCG
ATGAAATCAC GCTTACTGAA ACCGCTCCGG AAGATTTTTA CAATGCTTCT GGTGTTTCTC
ACTGTCATTG CCTGTAAAAA GGACGTCGTT CCCACGCAGC CTGCACCCGA GCCCGAACCG
GAAGTCGTGA TTCCCGGCAA AACGGTCGGG TTCGGCGTGG AATTGGTCCC GGCGGAAGAA
TATGAGAAAT TGCCTCTGAT CGCCGAGCCG GTCATGGCCA ACGGCCGCAC CATGAAGGAC
CCGACGCTCA CCCCAACGTA CGATTTGACG GCCAAAATGC CGCCCGTGGC CAGTCAGGGA
AACCAAAACT CCTGCACGGC ATGGGCAACG GCATTTGCCG CGAGAAGCTA CCTCCATTCC
CGCCTGACAG GCGCGAGCTA CGTGGGCAGC GACGGCAACC GCGACAATGC CCGCGTATTC
AGCCCGGCAT TTGTGTACAA TCAGATCAAC GGAGGCAACG ATAAAGGCTC ATTTACCTAC
AATGCGCTGG ACCTGATGAA GAACACAGGC GTGTGTTCCT GGCAGGATAT GCCCTATAAA
GACACCGATT TTCTCACCAA GCCAACCAAC GAGCAAACGC AAAAAGCGGG CAATTTTAAG
ATTAAAGATT GGGGTAGAAT CAATATTTCG GAGAGCGTTT TTAAGAAATT CATTTACTAC
GATTACCCTG TTATCATCAG TGCCTACCTC GATAACAGCT TCCTTGAACT TACGCACAAA
GACCCGCAAA ACGAATTTGT GTGGAAAGAA AATACCGGCG CCAAAAGTGC GCACGCCATG
GTTGTTGTTG GATACGACGA TAGCCGCAAA GCATTCAAAG TTCAGAATTC CTGGGGGAAA
AACTGGGCTA ACCGCGGGTA TATCTGGCTG TCGTACGAGC TGGTCGAAGA AGTGATCAGG
GAAGCGTATA TTATGATCGT CGATGACAAA TCCATTGTGG CACCACCGAA GGTCGAAACC
GTGGGGGCGA ACCTGGAAGA GGACGGCGAA GTGGTGTTCT CTGCCCGCGT TACCGACCGC
GGCGACGCGC CGATCCTTGG CGTCGGATTT TGCATTGCCA GTACTAGAAG TCTGCCCGAA
GTGAAATCGA GCGTGCGCAT TGAAGGGATC TCGATGGTGC CCTACAACTT TACCTATTCG
CAACGCCTCG CGGGCGATAC GCTCTGGTAC CGTGCCTATG CCGAAACCGT TTCGGGAACG
GTTTATGGCG ATACCGCCCA CGTGGTGCTC AAAAACACCA GTAACCCCGT CGGCTCACTG
GCCCAGAATA CGTTGTTTTT CAACGACGGA CGCCAGGCAT TCTCGGTCGA CGTCGATAAT
GGAACGGTAC TATGGACCTC GCCCAAGGAT GGATCTTCGA ACGATAAGGG AAGCGTTTAT
GCCAATGGCA TGTATGTTTT CGGCGAACAT CGCCTTGTGG GTGTTGATGC CGTCACCGGG
AAAACGAAGT GGATGTATTC CGATCCCCGG TACCACACCT CATTTTATTC CCAACCGGTG
GCAATCGGCG GAACAGTGTT CATGATCGGT GAGTATCGCC TCACTGCGAT TGACGTCCAG
TCGGGCCTGA AACTGTGGTC GCTGGACGCG GCCGAGTTCG CGAATGATGC CAATACGAGC
TTCCACGGCG GATTGAGCGT AACCAAAGAC AATAAGCTGT TTTTCGTAAC CTGGGGAAGG
AATTCTAAAT ACACGGGTTA CATCGTGAGC GATCCGAGAA ACGGCAAATC GATCACCGAA
TTCGATAACC AGGGCGAATC CTACTCCGGT AACCCGTTCT GGGACGATAA CCAGCTGGTG
ATGGCTACCG GCGCGAGAGA CCTGAAATCA TTCGCACTGA AACCCGCACC GAAGGAGATG
TGGCGCTCGC GCGAATTCCT GTCCAGCTCC GTGATCAGCA ACAATGTGGT GGTAGGGCAC
GACGTTGCCG GCAAGGCCCT CAAAGGGCTC GATAAAGCAA CGGGTACCCG GTTGTGGCAA
TACACGCCGG CGGTGGGAGA AATCTATACG AGGGCATGGA GCGTCTCAGG CAAATATGCG
GCCATGACGG TCATGGAGCG AACCAGCGCA TTTGGCGGCA ACCGCTTCAT CCATGTGATT
GACATTACCA ATGGAAAACT GGTGTGGGAG AAAAAGCTCG CCACCACAGT GGCCGAAAGC
GTTCTGGCGG CAGGCAACAA GGTTGTGACC TGGGATGGCG AAGCGGTGGC ATTCGACATT
GCCACCGGCA ACCAGCTTTG GAAAACCAAT GTAAACACCT CCAAACTCAT CTTCCCACGC
GATATGGTGG TTGTCCAGAA AAATGGAACG AGCTACTATA TGGTTGAATC AGGCATGAAA
TAG
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| Protein sequence | MNRVSSGSRA DTFLFVAVLK YKAAPRSAED FRNNILYQFS MKSRLLKPLR KIFTMLLVFL
TVIACKKDVV PTQPAPEPEP EVVIPGKTVG FGVELVPAEE YEKLPLIAEP VMANGRTMKD
PTLTPTYDLT AKMPPVASQG NQNSCTAWAT AFAARSYLHS RLTGASYVGS DGNRDNARVF
SPAFVYNQIN GGNDKGSFTY NALDLMKNTG VCSWQDMPYK DTDFLTKPTN EQTQKAGNFK
IKDWGRINIS ESVFKKFIYY DYPVIISAYL DNSFLELTHK DPQNEFVWKE NTGAKSAHAM
VVVGYDDSRK AFKVQNSWGK NWANRGYIWL SYELVEEVIR EAYIMIVDDK SIVAPPKVET
VGANLEEDGE VVFSARVTDR GDAPILGVGF CIASTRSLPE VKSSVRIEGI SMVPYNFTYS
QRLAGDTLWY RAYAETVSGT VYGDTAHVVL KNTSNPVGSL AQNTLFFNDG RQAFSVDVDN
GTVLWTSPKD GSSNDKGSVY ANGMYVFGEH RLVGVDAVTG KTKWMYSDPR YHTSFYSQPV
AIGGTVFMIG EYRLTAIDVQ SGLKLWSLDA AEFANDANTS FHGGLSVTKD NKLFFVTWGR
NSKYTGYIVS DPRNGKSITE FDNQGESYSG NPFWDDNQLV MATGARDLKS FALKPAPKEM
WRSREFLSSS VISNNVVVGH DVAGKALKGL DKATGTRLWQ YTPAVGEIYT RAWSVSGKYA
AMTVMERTSA FGGNRFIHVI DITNGKLVWE KKLATTVAES VLAAGNKVVT WDGEAVAFDI
ATGNQLWKTN VNTSKLIFPR DMVVVQKNGT SYYMVESGMK
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