Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_1589 |
Symbol | |
ID | 8225160 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 1912787 |
End bp | 1914034 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644929445 |
Product | efflux transporter, RND family, MFP subunit |
Protein accession | YP_003085997 |
Protein GI | 255035376 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.655904 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGC TATTAACCAT AACAGGCATG CTGACGTTGC TTTGTGCGCT GGCTGCCTGC CAAAACGAGA AGAATGCAAG CCACGAAGAG GCCCCGCACA CGGAACAGCA TTCGGACAAA AACTCAGCCG AAGGGCGCGA AAATACCGCC CGGCTGACCT CGGCCCAGAT CAAGAGCATC GGACTGGAAC TTGGTGCGAT TGAGGAAAAG GAGCTCACCG CGGCGCTTAA AGCGAACGGC ACCTTGAAGG TGCCCAACCA GAACCGCGCG ACGGTGAATA CGCTGTACAG CGGGGTGATC CGGACGCTGC ACGTGCAGCC GGGCGACAAT GTCAGGAAGG GCCAGGTCAT TGCTACCATC GCCAATCCCG AATTTATGCG CTCGCAAGAA GAATATGTGG CTGTTAACGA ACGTATTGAA CTGGCCGAAC TCGAATTTAA CCGTCAGAAA GAATTGTCGG CGGGTAATGC GGGCGCATTG AAAAATTTCC AGGCGGCGAG TACGGAGTTG AAAACGCTCC AAACGCGCCG GAATATGCTC CACCGCCAGA TCAGCCTGAT GGGCATCGAC CCGGAACAGC TCGGCGACGG AAAACTGATC GCCACGCTTT CCGTCAAAAG CCCGATCGCG GGCGTGGTGA GCGACGTTGA CGTGCAAATC GGCAGCTATG TGGACCTTAC CTCTCCCATT GCCGAGATCG TCGACAACAG CCAGCTTCAC CTCGATCTGT TTGTATATGA AAAAGATCTG CCTAAACTCC GCGACGAGCA GATCATCCAT TTTACACTCA CTAATGCGCC TGGAAAAGAA TACGACGCGC GGATTTTCTC GCTTGGCTCT TCGTTTGAAG GCGAAAGCAA GGCGGTTCCC GTGCATGCGA AAGTAATGGG CAACAAAACG GGCCTGATCG ACGGCATGAA TATTACGGCC GCCGTGAGCC TTGAAAAGGC CAAGGTCCCC GCCGTACCCA CCGAGGCGAT CGTGAGCTAC CAGGGCCGCG ACTACGTTTT TATCGCATCG GACGCGCCTC AGCACGACGA CGAGCATGAT CATGCCGCCG CTGATGCCGA CAGCGTGGAA CCGGGCGTCA CCTTCGAACT GATCCCCGTC GCCAGGGGCA CCACCGATGT GGGTTATACC GAAATCACCC TGTTGAAGTC TATTCCCGCC AATGCCAGAG TGGTGGTGAA GGGTGCCTTT TTTGTGCTTG CCAAAATGAG TAGTCCGGGA GGCGAGCATG CGCATTGA
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Protein sequence | MKKLLTITGM LTLLCALAAC QNEKNASHEE APHTEQHSDK NSAEGRENTA RLTSAQIKSI GLELGAIEEK ELTAALKANG TLKVPNQNRA TVNTLYSGVI RTLHVQPGDN VRKGQVIATI ANPEFMRSQE EYVAVNERIE LAELEFNRQK ELSAGNAGAL KNFQAASTEL KTLQTRRNML HRQISLMGID PEQLGDGKLI ATLSVKSPIA GVVSDVDVQI GSYVDLTSPI AEIVDNSQLH LDLFVYEKDL PKLRDEQIIH FTLTNAPGKE YDARIFSLGS SFEGESKAVP VHAKVMGNKT GLIDGMNITA AVSLEKAKVP AVPTEAIVSY QGRDYVFIAS DAPQHDDEHD HAAADADSVE PGVTFELIPV ARGTTDVGYT EITLLKSIPA NARVVVKGAF FVLAKMSSPG GEHAH
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