Gene Dfer_1547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1547 
Symbol 
ID8225118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1847980 
End bp1848828 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content56% 
IMG OID644929405 
Productglycosyl transferase family 2 
Protein accessionYP_003085957 
Protein GI255035336 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.123208 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.944766 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCT TCTCTAAAAG CTCGCTCATT ATTTCCACCT ACAACTGGCC GGAAGCATTG 
CGGCTTTGCC TGCTTAGTGT TAAAGAGCAG TCGGTGCTGC CCGATGAAGT GATCGTCGCC
GACGACGGCT CCACCGGCGC GACCGCGGAG CTCATCGAGG CATTGCGCCC CGCATTTCCC
GTGCGGCTCA TCCACGTGTG GCAGGCAGAC GAAGGTTTCC AACTCTCCAA GATCCGGAAC
AAGGCCATCG CAACCAGTTC CTGCGACTAC ATTATCCAGA TCGACGGGGA CCTGATCCTG
CACAGGCATT TCATCAAAGA CCACCTTGCA TTGAGCAAGC GCGGCACATT TGTGGCCGGC
AGCAGGGTGC TGATGAACAA AGAGTTGTCA GAAAAAACAC TACACCAACA GCAGCCACGG
GTGGCGCCGT TCCAATCGGG GCTGGGGAAT TTTTCCAACC GTTTCAGCAT ATCGTGGCTG
AGCAGGTACA TGGCCGACCG TTATAAAACG CAGGACATTT TCGCGCTGCG GGGCTGTAAT
ATGGCATTCT GGCGCGACGA TCTGCTGCGC GTAAACGGCT ACAATGAAAT TTTTCACGCC
TGGGGCCGGG AGGATAATGA AATCGCGGTG CGGTTGCTGA ATGCCGGATT GAGGAAACGG
GCGATCAAAT TCGGCGGCGT GGTGTTCCAC ATCTACCACC CCGAAGCCGA CCGCGCCGGC
TGCCCCGAAA ACGAGGCATA TCTCACCGAC GCGCGATTGC AGAAAACGGT GTTTTGCAGC
CTGGGCCTGC ATCAATACCT GCATGCGGCC GAGCCGGCCC AACTGGTGGA AAAAGAGTTT
GCGCTGTAA
 
Protein sequence
MKTFSKSSLI ISTYNWPEAL RLCLLSVKEQ SVLPDEVIVA DDGSTGATAE LIEALRPAFP 
VRLIHVWQAD EGFQLSKIRN KAIATSSCDY IIQIDGDLIL HRHFIKDHLA LSKRGTFVAG
SRVLMNKELS EKTLHQQQPR VAPFQSGLGN FSNRFSISWL SRYMADRYKT QDIFALRGCN
MAFWRDDLLR VNGYNEIFHA WGREDNEIAV RLLNAGLRKR AIKFGGVVFH IYHPEADRAG
CPENEAYLTD ARLQKTVFCS LGLHQYLHAA EPAQLVEKEF AL