Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_1483 |
Symbol | |
ID | 8225054 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 1760586 |
End bp | 1761218 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644929342 |
Product | NUDIX hydrolase |
Protein accession | YP_003085894 |
Protein GI | 255035273 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.163061 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTTCAA ATCCCTGGCT TGGCGCCATG AAGCGGGTCC TTGCTCTTTC TCAAACCGGC CTGGCTTTCC AGCCGAACGA CTACGACCGT GAACGCTACG AAGAAATCCG CCAGATCAGC CTGGACCTGC TCGCCCACAT GAGCAATGCC CCGGTGCAAC AGATCATGAG CCTTTTACCA AACGATGTCG GTTACATAAC GCCGAAAGTG GATGTGAGGG CGGTGCTTTT CAATGCCGGC CAGATCCTGA TGGTGCAGGA AAAAATAGAT AACGACCGCT GGACGCTGCC CGGCGGATGG GCCGACGTCG GGTACACACC ATTCGAAGTG GCGGTGAAAG AGGCTTTCGA GGAAACCGGT CTGCGCACGG AGGCGGTTCG GCTGCTAGCT GTTTTTGATA AAAGCCGGCA CGACCATCCC GAGGAACCGT GGTACGTTTA CAAATTTTTC ATCCTCTGCG AAGTGACCGG CGGCGAAATC CTGCGCCAAA CCACCGAAAC ATCGGACGTA GCCTGGGTGA AGTTCGAAGA CGTGGCCGGC CTCGATTTGT CGGAGAACCG GGTGACCTAC TCGCAGATCA CCCGGCTGCT GCCATTTGCT GCTGACCCCA CGCTGCCGGT TTTGTGCGAC TAG
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Protein sequence | MPSNPWLGAM KRVLALSQTG LAFQPNDYDR ERYEEIRQIS LDLLAHMSNA PVQQIMSLLP NDVGYITPKV DVRAVLFNAG QILMVQEKID NDRWTLPGGW ADVGYTPFEV AVKEAFEETG LRTEAVRLLA VFDKSRHDHP EEPWYVYKFF ILCEVTGGEI LRQTTETSDV AWVKFEDVAG LDLSENRVTY SQITRLLPFA ADPTLPVLCD
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