Gene Dfer_1483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1483 
Symbol 
ID8225054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1760586 
End bp1761218 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content57% 
IMG OID644929342 
ProductNUDIX hydrolase 
Protein accessionYP_003085894 
Protein GI255035273 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.163061 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTCAA ATCCCTGGCT TGGCGCCATG AAGCGGGTCC TTGCTCTTTC TCAAACCGGC 
CTGGCTTTCC AGCCGAACGA CTACGACCGT GAACGCTACG AAGAAATCCG CCAGATCAGC
CTGGACCTGC TCGCCCACAT GAGCAATGCC CCGGTGCAAC AGATCATGAG CCTTTTACCA
AACGATGTCG GTTACATAAC GCCGAAAGTG GATGTGAGGG CGGTGCTTTT CAATGCCGGC
CAGATCCTGA TGGTGCAGGA AAAAATAGAT AACGACCGCT GGACGCTGCC CGGCGGATGG
GCCGACGTCG GGTACACACC ATTCGAAGTG GCGGTGAAAG AGGCTTTCGA GGAAACCGGT
CTGCGCACGG AGGCGGTTCG GCTGCTAGCT GTTTTTGATA AAAGCCGGCA CGACCATCCC
GAGGAACCGT GGTACGTTTA CAAATTTTTC ATCCTCTGCG AAGTGACCGG CGGCGAAATC
CTGCGCCAAA CCACCGAAAC ATCGGACGTA GCCTGGGTGA AGTTCGAAGA CGTGGCCGGC
CTCGATTTGT CGGAGAACCG GGTGACCTAC TCGCAGATCA CCCGGCTGCT GCCATTTGCT
GCTGACCCCA CGCTGCCGGT TTTGTGCGAC TAG
 
Protein sequence
MPSNPWLGAM KRVLALSQTG LAFQPNDYDR ERYEEIRQIS LDLLAHMSNA PVQQIMSLLP 
NDVGYITPKV DVRAVLFNAG QILMVQEKID NDRWTLPGGW ADVGYTPFEV AVKEAFEETG
LRTEAVRLLA VFDKSRHDHP EEPWYVYKFF ILCEVTGGEI LRQTTETSDV AWVKFEDVAG
LDLSENRVTY SQITRLLPFA ADPTLPVLCD