| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1455 |
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| Symbol | |
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| ID | 8225026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 1726451 |
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| End bp | 1728895 |
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| Gene Length | 2445 bp |
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| Protein Length | 814 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644929314 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003085866 |
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| Protein GI | 255035245 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.749595 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATTCC TTTTAACCCT TGCATTCCTT TTTTGCCTGT TGGCCACGGC CGGGGCGCAG
CGCAAACCTT CTATTTCCGG CAAAGTCACC GACCGGCAGA CCGGCCAGGG GCTGCCTTAT
GCGTCCGTTG CATTGTACCG CTCGGCCGAC TCGGCGTTGG TAAGCGGCGT GCTAGCCGAC
GACACAGGCA ATTTCCGGTT CGACAAGCCT GGTGCGGAGG CATATTATCT TGAAACGCAA
TATATGGGAT ACAATACGGT GCGCACCACA GTGCCAGCTG GCGTGGAGGA GCTTGCGCCC
ATTGCATTGC TGGCCGACGG GCGTGTACTG GACGCCGTGG AAGTAACCGA CAACCGCAAT
GCGGTGGAAA GCCGGATCGA TCGCCAGGTG TATCGTGCCG GTGCGTTTCT GGGCAGCCAG
GGCGGCACGG CGGTGGATGT ACTCAAAAAC ACGCCGTCGG TAACGGTGAA CAGCGAAGGC
GACATTACCT TACGTGGCTC CACGGGCTTC CTGGTGCTCG TGAACGGCAA ACCCGTGCAG
ACCGACCCGT CGGTAGTGCT CAACCAGATC CCCGCCAACA GCATTGAAAA CGTCGAAATC
ATTACCAGTC CTTCGGCTCG TTTCGATCCG GATGGCAAAT CAGGCATCAT TAATATCACC
ACCAAGACCG CTGAAAAGAA CAGTCAAAGT CTGATTGTGA ATATTCTGGG CGGATTGCCA
TCGGTCCGCA CTTACAACAA CCTGAAAAAC CCGCAGCGAT TCGGGGCGGA TGCCTCGTGG
GGTTTGCGGG CCGGAAAATG GGAGGTGAAC CTGAGCGGTA ATTACCTGCG GAACGACCTC
GCCGGAAGGA GAGTGGGCGA TGTGAATACG ACCATCGACG GCATTTTTAC TACCTTCCCG
TCCGACGGCG AGCGTAGTTT CAAACGGTAC AACTACACGG CGCGGGCGTC GGTGAGCTTC
ACGGCCGACC CTTCGAATGT GATTTCGGCA GGTTTTTACA AAGGATACCG CTTTCAGTCG
CGGAGAGCAG ACCTGGTTTA TAACAATACA AAAACCGACC TGGAAACGGG GCAGAACCTG
GGACAGATCA TTTATTTTAA CTCCAATATT GCCAGGAAAA CGGCCGATGT AACGTCCGCT
AACCTCGATT ACCTGCACCG TTTTGGGAAC AAATCCGAAC TGACGCTGTC GGGGCTGATC
GAAGCGGCGG ACCTTGACGG CCTGACCACG AACATGAACC TGTCCGAACC CGGCCGCAAC
CGCACGCTGC AGAGCACGCG CAATCCCGGC GAGAATCCAT TAAATGCATT TCGCCTGCAA
GCAGATTACG TCGTGCCCAT TGGCAAAGGC AAACTGGAAG CCGGTTATCA GTACCGGAAC
CAGGAACAAA AAGGGGTATT TCAATACCTT GATCAAAACC TGGAAACGGG CGAATTTGTG
GAGGTGCCGC AATTTTCGAA CCGTACGCGG CTGTTGAACC ATATTCATTC GGTGTACGGG
CAGTATAGCG GGAAATCGGG GAAGCTGGAA TATTCGGGCG GTTTGCGGTA TGAATACGCG
ACGCGCCAAT TCACCGCCGG GGGCACGGAA ACCCGTGATC TTAACCTCTC TAATTTCTTT
CCGTCGGCCC AGCTGCAATA TGCATTTTCC AAAGGCTGGC GCGCGAAGGC AGGCTACACA
CGCCGCGTGC AGCGCACCAC CAACAACGAG CTCAACCCAT TCCCCGAACG CGAGCATTCC
GAAACCCTCG AATCGGGCGA CCCGGACATT TTGCCGGAGT TTATCGGCCA GGCGGAAGCC
GGTTTAGTTA AGGAATTTGA AAAAGGCAGC GCGTTTCTGA CCCTGTATCA TCAGCGGATC
GACAACGTGT TGAACCGCGT GAACAGCGTC TACAACGATA GCATCATCAA CCGCATTTAC
ACCAATGCGG GCCTGGCAAC CTCCTGGGGC ATAGAAGCAG GTGGAAATGC AAATGTGACC
AGATGGTGGC AACTTTACGC GGGCGCAAAC GTGTACCGGT ACGCGATCGA AGGCGGGCTT
TTCCGAAATA CGGTAGTGGT GAACACGTCG AGCGTAGTAT ATTCCGTCAA CGCTACCTCT
ACATTCAAAA TCGCACCGGC ATGGCAGTTG CAATGGGGGA TCAGCTACTT GTCCAAAAGG
GTGACGGCGC AAGGGGAGGA CTCGCGGTTC GTGAATCCCT CACTGTCGGT AAAGAAGACG
TTCCTGAAAG GCAAGCTCGC CGCCACATTG CAATGGCAGA ATATGGACCT GGGCATTACC
GGCGCCAATC AGCAGCGCAT ATCTACCTGG GGAAAGGATT TTTTCACGAC CACCAACTAC
ATTCAGGAAA CCGACATTTT CCTGTTAAAC CTTAGCTATA ATCTCAACCA GCTGACCAAA
AAAGCAAAAC TCCCGGCCAG CGAATTCGGT GAGCGGGAGT TTTGA
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| Protein sequence | MRFLLTLAFL FCLLATAGAQ RKPSISGKVT DRQTGQGLPY ASVALYRSAD SALVSGVLAD
DTGNFRFDKP GAEAYYLETQ YMGYNTVRTT VPAGVEELAP IALLADGRVL DAVEVTDNRN
AVESRIDRQV YRAGAFLGSQ GGTAVDVLKN TPSVTVNSEG DITLRGSTGF LVLVNGKPVQ
TDPSVVLNQI PANSIENVEI ITSPSARFDP DGKSGIINIT TKTAEKNSQS LIVNILGGLP
SVRTYNNLKN PQRFGADASW GLRAGKWEVN LSGNYLRNDL AGRRVGDVNT TIDGIFTTFP
SDGERSFKRY NYTARASVSF TADPSNVISA GFYKGYRFQS RRADLVYNNT KTDLETGQNL
GQIIYFNSNI ARKTADVTSA NLDYLHRFGN KSELTLSGLI EAADLDGLTT NMNLSEPGRN
RTLQSTRNPG ENPLNAFRLQ ADYVVPIGKG KLEAGYQYRN QEQKGVFQYL DQNLETGEFV
EVPQFSNRTR LLNHIHSVYG QYSGKSGKLE YSGGLRYEYA TRQFTAGGTE TRDLNLSNFF
PSAQLQYAFS KGWRAKAGYT RRVQRTTNNE LNPFPEREHS ETLESGDPDI LPEFIGQAEA
GLVKEFEKGS AFLTLYHQRI DNVLNRVNSV YNDSIINRIY TNAGLATSWG IEAGGNANVT
RWWQLYAGAN VYRYAIEGGL FRNTVVVNTS SVVYSVNATS TFKIAPAWQL QWGISYLSKR
VTAQGEDSRF VNPSLSVKKT FLKGKLAATL QWQNMDLGIT GANQQRISTW GKDFFTTTNY
IQETDIFLLN LSYNLNQLTK KAKLPASEFG EREF
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