Gene Dfer_1386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1386 
Symbol 
ID8224957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1632441 
End bp1633421 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content56% 
IMG OID644929246 
ProductAlpha/beta hydrolase fold-3 domain protein 
Protein accessionYP_003085798 
Protein GI255035177 
COG category[I] Lipid transport and metabolism 
COG ID[COG0657] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.372479 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACGC TGCATATCAT CGACCCCGCC AACGACCCTG CTATTTTTGA AGATGTTAAA 
ACCTTCCTCA ACGCGCTGAA TTCCGGCGGC GGCACGCCAT TGGAACAACT CTCGCCCGCT
GATGCCCGTA ATGTGCTCGT AGGCGCACAA AATTCGGTGG AAGTGGATCT GTCGGGTGTG
GAAACGAGTG AAAAAACCAT TACACAGGAC GGCATTACGG TTAAACTCGA CATTGTGAAA
CCCGAAGGTG CCACCGGCAA ACTCCCCGTG TTCATATTCA TTCACGGCGG CGGCTGGGTG
CTCGGCGACT TCCCTACCCA CCAACGCATT GTCCGCGACC TGGTGGTTTA CTCCGGCGCA
GCAGCTGTTT TTGTCAATTA CACCCCGTCA CCCGAAGCCC AATATCCGAC GGCGATCAAC
GAAATTTACG CCGCTACCAA ATGGGTGGCC GCACATGGCG AAGAAATTAA TGTGGATGGC
AGCAGGCTGG TCGTCGCGGG CAATAGCGTC GGTGGCGACA TGGCCGCCGT AACCGCCCTA
AAAGCGAAAG ACGACAATGG CCCGGAAATC AAATTGCAGG TGCTGCTCTG GCCCGTTACC
GACGCCAATT TCGAAACCAC ATCCTACAAC CAGTTCGCCG AAGGCCGCTT CCTGACCAAA
AACATGATGA AATGGTTTTG GGATAACTAC ACCACCGACC CCGAAGAACG GAAACATCGC
TACGCATCGC CATTGCAAGC TACCACTGAA CAGTTGCAGG GACTTCCCCC AGCCCTGGTC
CAAACTGCCG AAAATGACGT CCTGCGCGAC GAAGGCGAGG CTTATGCTCG CAAACTGGAA
GCTGCGGGCG TAAAAACCAC GCTCGTGAGA TACCAGGGAC TGATCCACGA TTACGGCCTG
CTGAACCCGC TGGCAAACGT TCCGGCGGTG CAGGGCGCAT TGCTCCAAGC CGGTGCCGCC
ATCCGCGAAG CTTTGAAATA A
 
Protein sequence
METLHIIDPA NDPAIFEDVK TFLNALNSGG GTPLEQLSPA DARNVLVGAQ NSVEVDLSGV 
ETSEKTITQD GITVKLDIVK PEGATGKLPV FIFIHGGGWV LGDFPTHQRI VRDLVVYSGA
AAVFVNYTPS PEAQYPTAIN EIYAATKWVA AHGEEINVDG SRLVVAGNSV GGDMAAVTAL
KAKDDNGPEI KLQVLLWPVT DANFETTSYN QFAEGRFLTK NMMKWFWDNY TTDPEERKHR
YASPLQATTE QLQGLPPALV QTAENDVLRD EGEAYARKLE AAGVKTTLVR YQGLIHDYGL
LNPLANVPAV QGALLQAGAA IREALK