| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1377 |
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| Symbol | |
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| ID | 8224948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 1617203 |
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| End bp | 1618519 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644929237 |
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| Product | Mandelate racemase/muconate lactonizing protein |
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| Protein accession | YP_003085789 |
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| Protein GI | 255035168 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.488669 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGGAG CCGGATCGGC TGCGGGGCTG CTCGGCCTGC TGGGCTCGGC TGATCGTGCG
CATGCGCAGG CAAATTACAC GCAACCCGCC TACACAAAAG GCATGGCGCC CGTGAAAATC
AAGAGCGTGA AAGCCATTGC CACCGCACCC CAGGGCTCCA ACCTCATCGT GGTGAAGGTG
GAAACCACCG AGCCAGGCCT CTACGGCCTC GGCTGTGCAA CATTCACCCA GCGGGCATTT
GCAGTGGTGA CGGCCATTGA CACTTACCTC AATGAATTCT GCGTCGGAAA GGACGTCGAC
AATATCGAAG ACATGTGGCA TTCCACCTAC GTGAGCTCCT ACTGGCGCAA TGGCCCGGTG
CTGAACAATG CATTAAGCGG GCTGGACGAA GCGCTTTGGG ACATCAAGGG CAAGCGTGCC
GGAATGCCTG TGTACCAGCT GCTTGGCGGT AAAGCGCGCT TCGCGATACC ATGCTATACC
CACGCCAATG GTACCACGCC CGAGGCCGTG GCCGACGATG TGCAGCGCAT TATGGACCGC
GGCTTCAAGT ACATCCGCAT CCAGCAGGGC GGCTATGGCG CGGTAGGCGC CACCGAGCAG
AAGCCCGACT TTAAAGCGGC CGGGTTTGGA GGGGCCACCG ATAATTTTAT GAATGAGCGG
GCGTACCTGA AATCGGTACC CAAGCTTTTT GAAGCGGTGC GGAAGCGCTG CGGCGAGGAG
ATCGAGCTGC TGCACGACAT TCATGAACGA GTGCAGCCGA TGGACGCCAT CAATATGATC
CGCGCATTGG AGGATTACCG GCCATTCTTC ATCGAAGACC CGTTTTCGCC CGAAAACATG
GGTTGGTTCC GCCAGTTGCG CCAAAGCACG ACGGTGCCCA TTGCGATGGG CGAGCTGTTC
AACAATGTGA ACGAGTTCCG CGACCCGATG ACCAACCAGT GGTTCGACTA CATCCGCTGC
CACGTGTCGC AGATCGGCGG CATTACGCCG GCCATGAAAG TGGCGCGGCT AGGGGAGTGG
TTCAATGTAA AAACGGCCTG GCACGGTCCG GGTGACGTTT CGCCGGTGGG CCACGCGGCG
CACGCGCACA TTGATCTCGC GGTATGGAAC TTCGGTATCC AGGAGGCTGT GAGCTTTAAT
GAGAAAACGC AGGCGATTTT CAAAGGGTGT CCTACGATGA AGGACGGGTA CATGTCGGTG
AACGAAGTGC CCGGACTGGG TGTGGATATT GATGAAAAAG AAGCGGCTAA ATATCCGATT
ACCAGCAAAT CCAACTGGCA GGTTCGTAAA TTTGACGGAA CGAGCATCCG GCCGTAG
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| Protein sequence | MLGAGSAAGL LGLLGSADRA HAQANYTQPA YTKGMAPVKI KSVKAIATAP QGSNLIVVKV
ETTEPGLYGL GCATFTQRAF AVVTAIDTYL NEFCVGKDVD NIEDMWHSTY VSSYWRNGPV
LNNALSGLDE ALWDIKGKRA GMPVYQLLGG KARFAIPCYT HANGTTPEAV ADDVQRIMDR
GFKYIRIQQG GYGAVGATEQ KPDFKAAGFG GATDNFMNER AYLKSVPKLF EAVRKRCGEE
IELLHDIHER VQPMDAINMI RALEDYRPFF IEDPFSPENM GWFRQLRQST TVPIAMGELF
NNVNEFRDPM TNQWFDYIRC HVSQIGGITP AMKVARLGEW FNVKTAWHGP GDVSPVGHAA
HAHIDLAVWN FGIQEAVSFN EKTQAIFKGC PTMKDGYMSV NEVPGLGVDI DEKEAAKYPI
TSKSNWQVRK FDGTSIRP
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