Gene Dfer_1375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1375 
Symbol 
ID8224946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1614104 
End bp1615375 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content56% 
IMG OID644929235 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003085787 
Protein GI255035166 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.219996 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCCC AACTCGCACA GGTACGCTGG TACCGGATTA TTCCCGTTGT ATTTGTCACA 
TATAGCCTCG CGTATCTCGA CAGGGCCAAT TTCGGTTTCG CCGTGGCGGG CGGAATGGCC
GAAGACCTGC GCATCACGCC CAACACTTCC ACGCTGCTGA GTTCGCTCTT CTTCCTGGGT
TACTTCTTTT TTCAGATTCC CGGCGCGCAT TATGCGGCTA CCCGCACCGC CAAGAAGCTG
ATATTCATAT CGTTGATCCT CTGGGGAGGC CTCGCGGCGG CTACGGGCAT GGTGAACGAT
ACCACCGTGC TGATCGTCAT CCGGTTCATG CTTGGCGTCG TGGAAAGCGC CGTGATGCCC
GCCATGCTGA TATTGCTCAG CCAATGGTTT ACCAAAGAGG AACGCTCGCG GGCGAATACA
TTCCTGATTT TGGGCAATCC GGTGACGGTA TTGTGGATGT CGGTGCTCTC GGGCTACCTC
ATCGACTCGA TGGGCTGGCG CTGGATGTTC ATCATCCAGG GGCTTCCGGG CATCCTTTGG
GCATTTATCT GGTGGAAACT CATCGACGAG CGGCCGATGG ACGCCGATTG GCTCACACAC
GAGGAAAAAC TTGCCGTGGA GGAAAAGCTG AAAGCGGAGC AAGCGGGCAT TAAACCCGTC
AAAAACTATG CGGAGGCTTT CAAATCCACC AAAGTGATTT TGCTTTGCCT GCAATACCTG
CTGTGGAGCG TGGGCGTTTA CGGGTTTGTT ATGTGGCTGC CGTCGATCAT CAAAGCGGCA
CCCAATATGG ATATGGTCAC CACAGGCTGG CTTTCGTCGG TGCCTTACGT GCTCGCGGTG
ATCGGGATGC TGGCGGCTTC CTATTTTTCG GACAAAACAG GTAACCGTAA AATCTTCGTC
TGGCCGTTTC TGCTGGTGGC GGCCGTGTGC CTGTACGGGG CCGTGTGGAT CGGTACAGAG
CAGTTTTGGG TGGCTTATGC CTTGCTGGTG GTGGCTGGCG GCGCATTATA TACGCCGTAC
GGCCCTTTCT TTGCGGCCAT CGCCGAAATC CTGCCCAAAA ATGTGATTGG CGGGGCCATC
GGGCTTATCA ATAGCCTGGG TGCATTAGGC TCATTTGCAG GCTCTTACCT GGTGGGTTAT
CTCAATAGCG AAACGGGGAA TTTCAACGCA TCGTACATCC TGATGTCCGT CGCGCTGGTG
CTGGCGACCG TGATCACTAT CGCCGTCATT CCCGCTCCGC AGATAGCCCG GCCCGTCGCC
GAGGAAGTAT AA
 
Protein sequence
MKPQLAQVRW YRIIPVVFVT YSLAYLDRAN FGFAVAGGMA EDLRITPNTS TLLSSLFFLG 
YFFFQIPGAH YAATRTAKKL IFISLILWGG LAAATGMVND TTVLIVIRFM LGVVESAVMP
AMLILLSQWF TKEERSRANT FLILGNPVTV LWMSVLSGYL IDSMGWRWMF IIQGLPGILW
AFIWWKLIDE RPMDADWLTH EEKLAVEEKL KAEQAGIKPV KNYAEAFKST KVILLCLQYL
LWSVGVYGFV MWLPSIIKAA PNMDMVTTGW LSSVPYVLAV IGMLAASYFS DKTGNRKIFV
WPFLLVAAVC LYGAVWIGTE QFWVAYALLV VAGGALYTPY GPFFAAIAEI LPKNVIGGAI
GLINSLGALG SFAGSYLVGY LNSETGNFNA SYILMSVALV LATVITIAVI PAPQIARPVA
EEV