Gene Dfer_1346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1346 
Symbol 
ID8224917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1584927 
End bp1586498 
Gene Length1572 bp 
Protein Length523 aa 
Translation table11 
GC content58% 
IMG OID644929207 
ProductMicrocystin LR degradation protein MlrC-like protein 
Protein accessionYP_003085759 
Protein GI255035138 
COG category[S] Function unknown 
COG ID[COG5476] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.27554 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTA CATTTTCCCT GATCCTTTCT TTCCTGCTGG CCGGTTTGCA GACGCTTTCC 
TTTGCGGACA GCGGAAAAAA ATCCAAAGCA CTTCCCCGGA TCGCGATCGC CGGGCTCGGC
ATCGAGTCGA GTACGTTTTC GCCTGCCCGC ACGGAGGAAC CGGCGTTCAA GGCGAAATAC
GGCGAACAGA TTTTTACCTC CTACCCCTTC ATGGCCGCCG ATTCCAGTCT GCGCAAACGC
GCCGAATGGC TTCCGGCGCT GGTGGGGAAA TCGCTGCCGG GCGGTATGGT GACGCGGGCG
GCCTATGAGT CGCTGGTGAA GCAGACCCTC GACCTGCTCA AAAAGAACGG CCCGTACGAC
GGCCTGTATT TCGATATCCA TGGTGCCATG AGCGTAGAAG GACTGGACGA TCCCGAGGGT
GACCTCATTA CCCGCGTCCG CGAGGTGATC GGCAAAAAAG TGCTCATTTC TACGTGCATG
GACCTGCACG GCAACGTCTC GTGGCGTCTC GCACAGCACA CGGACCTCAT TACGTGCTAC
CGCATGGCGC CGCATGAGGA CGCCATGCAA TCCAAGCGCC GCGCGGTCGA AAACCTGCTC
TCGCGACTGG AAAGCGGCAA AGGAAAACCC GCCTACAAAG CGTGGATTCC CGTTCCGGTC
CTTCTCCCCG GCGAAAAAAC CAGTACGCGC ATCGAGCCCG GCAAATCGCT TTATGCCAAA
GTCGCCCCCG CCTCCAAGCA GCCGGGCGTG ATCGACGCGG CCATGTGGGT GGGCTACGCC
TGGGCCGACG AGCCGCGCAA CCACGCGGTA GTAATGGTGA CCGGCGACGA CAAAGCCAAC
GTGACCCAAA GCGCCGAAAT GCTCGCAAAA AGTTTCTGGG ATGTCCGCAA GGAATTCGCA
TTCGTAGCAC CCACCGACGA TCTGAAAGGC GCACTCAACA AGGCACTCGG CAGTAACAAG
CGACCGTTTT TCATCAGCGA CTCGGGCGAT AATCCCACGG CAGGCGGTGC AGGCGACGTC
ACCTGGACGA TCACCGAAAT CCTGAAACGA CCGGAATTCA AAGCCGAAAA CGGGCCATCA
CTCATTTACG CCTCCATTCC CGGCCCCGAA CTGGTGGAAG CAGCGGTGAA AGCAGGCGTG
GGAGGCAAAA TCGACGCGCA TGCCGGTGCA AAGGTGGACG CACGTTTTGC GCCGCCCGTT
CACCTGGCAG GCACCGTGGA GGCCATCCAT CACGGCGATA TCAATGCTGA AACCGAGGTG
GTTGTGAAAG TGGGCAGCGT GCGCGTAATC GTTACGAAAA AGCGTAAGCC CTACCATAAA
GAAGCTGATT TCACCAGATT GGGCCTCAAC CCGCGCAAGT CGGATATTGT AGTGGTAAAA
ATCGGTTACC TCGAACCGGA GCTTTATAAC ATGCGCGCTG ATTGGATTCT GGCGCTTACG
CCGGGCGGCG TCGACCAGGA CTTGGAGCGA TTGCCCTACA AACGCATTAA ACGGCCGATG
TTCCCGCTGG ATAAGGACAT GAAAGAGCCC GATCTGAAAG CGAAACTGGT GCCGTCATCT
GACAGTAATT AG
 
Protein sequence
MKITFSLILS FLLAGLQTLS FADSGKKSKA LPRIAIAGLG IESSTFSPAR TEEPAFKAKY 
GEQIFTSYPF MAADSSLRKR AEWLPALVGK SLPGGMVTRA AYESLVKQTL DLLKKNGPYD
GLYFDIHGAM SVEGLDDPEG DLITRVREVI GKKVLISTCM DLHGNVSWRL AQHTDLITCY
RMAPHEDAMQ SKRRAVENLL SRLESGKGKP AYKAWIPVPV LLPGEKTSTR IEPGKSLYAK
VAPASKQPGV IDAAMWVGYA WADEPRNHAV VMVTGDDKAN VTQSAEMLAK SFWDVRKEFA
FVAPTDDLKG ALNKALGSNK RPFFISDSGD NPTAGGAGDV TWTITEILKR PEFKAENGPS
LIYASIPGPE LVEAAVKAGV GGKIDAHAGA KVDARFAPPV HLAGTVEAIH HGDINAETEV
VVKVGSVRVI VTKKRKPYHK EADFTRLGLN PRKSDIVVVK IGYLEPELYN MRADWILALT
PGGVDQDLER LPYKRIKRPM FPLDKDMKEP DLKAKLVPSS DSN