Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_1316 |
Symbol | |
ID | 8224887 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 1547959 |
End bp | 1549077 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644929177 |
Product | signal transduction histidine kinase, LytS |
Protein accession | YP_003085729 |
Protein GI | 255035108 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3275] Putative regulator of cell autolysis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGAAGA AATTATTGTT TGAAAAACTC CCGGAAAAAA TCCCGTCGGC AAACCGCTGG GCCTATGCTG CCTGCGCGGT TGCATTCCTG TTGTTTTTCA ATTTTCTGAC GGTCGGAGCG GCAGTTTTTG GCGACCCTGC ATTGTTTCTG AAAACGACAT TCCTGAATGC GGCCATCCTG GGTGCGGCAT TCGGCATCCA ATCGGCGGTG GGACGGTACA TTACCCGGCG CTACGCCGAT GTGCAGCAGA CGCTCGTGCG CGTGGCTTTG TCTATTTGCA TGCACGCGGT GGTTTCGGGC GTATTTGTGC TGCTGGCGGG CTGGTTGTAC ATTGGCTGGG GCTTGTTCCG TTCGGTTTTG ACGGCCGATG CCCTGGTAGT CGTGTACATG GTGAATCTCG CGGCGATCGT GCTCGGCACG GGGCTATGGG AAAGCTTCGA CGCTCTCGCA CGCTGGCGGC AGCACGAGAT CAACAGCGAA CGGCTGATGA AAGAGAACGT AAACGGGCAG CTCGAAAGCC TCAAAACGCA GATCAGCCCG CATTTTCTTT TCAATACATT AAACTCCCTC TCTGCGCTGA TCGGCGAAGA CCCGCAAAAG GCGGAACAGT TTGTGGATGA AATGGCGCGG GTGTACCGCT ATCTGCTGCA AACGAACCAT TCGTCCGTAG ACCAGGGGGA TTTCGGGCAG TTAACGACGT TAAAAAAAGA ATTGTCGTTC ATTGAATCGT ACGGACACCT CCTCAAAACG CGATACGGCG ACGGTATGAA GCTTTACATC CACGTGGAAG ACAGCTTCCT GGACGCCCGC ATTCCGCCGC TAACGCTGCA ATTGCTCGTC GAAAACGCTG TTAAGCACAA TGTAATACGC GCGAGCAGAC CGCTCACGAT TTTTATCCTG AGCACCGTGG AGGGAGGACT GATGGTGCGC AACAACCTGC AAAAGAAAAA TCTCACGGCC GGTGCGGAAA ACATCGAATC CACGCACGTA GGCCTGGCGA ATATCATTAC CAAATATAAA CTGCTGGCAG AATACCGGGC CTGGCCTGGC CCAGCCGATG GTCGAAAGCA ATCACGAGTT TTTCACCGTA ACCATCCCAT TGATTTCCTG AAAGCATGA
|
Protein sequence | MKKKLLFEKL PEKIPSANRW AYAACAVAFL LFFNFLTVGA AVFGDPALFL KTTFLNAAIL GAAFGIQSAV GRYITRRYAD VQQTLVRVAL SICMHAVVSG VFVLLAGWLY IGWGLFRSVL TADALVVVYM VNLAAIVLGT GLWESFDALA RWRQHEINSE RLMKENVNGQ LESLKTQISP HFLFNTLNSL SALIGEDPQK AEQFVDEMAR VYRYLLQTNH SSVDQGDFGQ LTTLKKELSF IESYGHLLKT RYGDGMKLYI HVEDSFLDAR IPPLTLQLLV ENAVKHNVIR ASRPLTIFIL STVEGGLMVR NNLQKKNLTA GAENIESTHV GLANIITKYK LLAEYRAWPG PADGRKQSRV FHRNHPIDFL KA
|
| |