| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1256 |
|---|
| Symbol | |
|---|
| ID | 8224827 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 1485704 |
|---|
| End bp | 1488010 |
|---|
| Gene Length | 2307 bp |
|---|
| Protein Length | 768 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644929118 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003085670 |
|---|
| Protein GI | 255035049 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.471083 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.43863 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCTA TTATTCAGAC CGTTACCTTA TTTGCACTCA TGATTTTTAA ATGCCACGCA
CAGGCCCCGG GCCCGTTGAC GCTCTGGTAC GAGCAGCCTG CCCGGCAATG GGAAGAGGCG
CTCCCCATCG GAAACGGCGC ATTGGCGGCG ATGATTTTCG GAGGCGTAGA AACGGAGCAG
ATCCAGTTTA ACGAAGAAAC GCTGTGGACG GGCGAACCGA GAAGCTACGC GCACAAGGGC
GCATCGGCAT ACCTGGAACA GATCCGCCGG CTGCTGAACG AGGGCAAACA GAAAGAAGCA
GAAGCGCTGG CCAACGAGCA ATTCATGAGC CAGCCCATGC GGCAAATGGC TTATCAGGCT
TTTGGTGATG TGTATTTAGA TTTTCCCGGC CATGTTCAGC ATCGCGCATA TCACCGTGAA
CTCGACCTCC GTGCGGCCAC TGTAAAAAGC AGCTACGAGT CCGGCGGCGT GCGCTACACG
CGCGAAGCAT TTGCGAGTTA TCCGGCCAAG GCGATCTACT ATCATATCAA CAGTTCCCAA
AAAAGTAAGC TGGATTTCAC CGTGCGCATG TCGACCATAC ACGCGAAACC GAAAGTGAAT
GCCGAGAAAA ACACCATCGA GCTGGAAGTT CAGGTCGAAA ACGGGGCGCT CCACGGGCTG
GCCCGATTGA AATTACTAAC CGACGGAAAA TTGAAAACAG CCGACGGAAA AATAGAAGTT
ACCGGCGCCA CCTCGGCGAC AATTGTGCTC TCGGCAGCGA CGAACTATAT CAATTACAAA
AATGTAAACG GAGATCCGCG CGCCAAGGTA ACGGCCGCAT TGCAAAACGC ACCGGACGAT
TACAAGAAGG CCGCCAGCGG TCATTTGGCT GATTATCAGA AACTCTTCAA CCGTTTCGCC
CTGGATTTGC CTGCCAGCAA AGGCTCGGCA CTTCCTACCG ACCAGCGCCT GAGCCAATTC
AAACACAATC CGGATGATCC GGCATTGCTT GCATTATATG TACAGTTTGC ACGCTACCTG
CTCATTACGA GCAGCCGTCC GGGAACGCAT CCGGCCAACT TGCAGGGCAA ATGGAACCAT
AAGCTCAATC CGTCGTGGGA TAGTAAGTAC ACCGTCAATA TCAATACCGA AATGAACTAC
TGGCCCGCGG AGCTTACCAA CCTCAGCGAA TGCCATCAGC CTTTGTTTCA AATGGTAAAA
GAGGTTTCCG AAACCGGTGC CGAAGTGGCC AAAGAACATT ATAATGCAAA CGGCTGGGTT
TTACACCACA ATACCGACGT GTGGCGTGGT GCGGCGCCGA TCAATGCGTC CAACCACGGC
ATTTGGGTGA CGGGCGGTGC CTGGCTGAGC CTGCATTTGT GGGAGCATTA CCGGTTTACG
GAGGATAAGG CATTTCTTCA AAACACCGCC TACCCGCTCA TGAAAGGCGC AGCGCAGTTT
TTCCTCGACT TTCTCGTGAA AGACCCGAAA ACCGGACACC TGGTGAGCTC GCCGTCCAAT
TCGCCGGAAA ACGGCGGCCT GGTGGCCGGC CCGACGATGG ACCACCAGAT CATCCGGGCG
TTGTTCAAGG CTTGCGCCGA GACGGCCGGC ATTTTGAAAA CCGATGCCGT ATTTGCCCAA
AAACTTACCG AAACCGCCAA ACAAATCGCC CCGAACCAGA TTGGCCGCCA CGGTCAGTTG
CAGGAATGGA TGACGGACAT CGACGACACT ACGAACCATC ACCGCCACGT GTCGCATTTG
TGGGGCGTGT ACCCGGGCGA AGAAATCACA CCCACCGGCA CGCCCGACCT GCTGAAAGCC
GCCATCAAAT CCCTTGAATA CCGCGGCGAC GACGGCACCG GATGGAGCCT GGCCTGGAAA
ATCAATTACT GGGCACGGTT TCTGGACGGC GAGCATGCCT ACACGATGAT CCGCAAGCTT
TTCAACCCCG TGTTTGAATC CGGCCGTAAA ATGAGCGGCG GCGGCTCCTA CCCCAACCTC
TTCGACGCTC ACCCGCCATT CCAGATCGAT GGGAATTTCG GCGGTGCATC AGGCATTCTC
GAAACGCTGG TGCAGAGCCA TCTGGGCGAG ATCAACCTCC TGCCCGCATT GCCCAAGGCA
TTGCCCGACG GCCGAGTGAG CGGATTGTGC GCACGGGGAG GCTTCGAGAT GGACATGGAT
TGGAAAAACG GCAAGCTCAC CGGGCTGAGC ATCCGATCCA AGGCCGGCAA CGAATGCAAG
GTGCGCTACG GAGCCCAGGT AATTTCCATC CCGACGGAGA AAGGTAAAAC CTATCGTTTC
GGGCCGGATT TGAAGGTTTT GAAATAA
|
|---|
| Protein sequence | MKPIIQTVTL FALMIFKCHA QAPGPLTLWY EQPARQWEEA LPIGNGALAA MIFGGVETEQ
IQFNEETLWT GEPRSYAHKG ASAYLEQIRR LLNEGKQKEA EALANEQFMS QPMRQMAYQA
FGDVYLDFPG HVQHRAYHRE LDLRAATVKS SYESGGVRYT REAFASYPAK AIYYHINSSQ
KSKLDFTVRM STIHAKPKVN AEKNTIELEV QVENGALHGL ARLKLLTDGK LKTADGKIEV
TGATSATIVL SAATNYINYK NVNGDPRAKV TAALQNAPDD YKKAASGHLA DYQKLFNRFA
LDLPASKGSA LPTDQRLSQF KHNPDDPALL ALYVQFARYL LITSSRPGTH PANLQGKWNH
KLNPSWDSKY TVNINTEMNY WPAELTNLSE CHQPLFQMVK EVSETGAEVA KEHYNANGWV
LHHNTDVWRG AAPINASNHG IWVTGGAWLS LHLWEHYRFT EDKAFLQNTA YPLMKGAAQF
FLDFLVKDPK TGHLVSSPSN SPENGGLVAG PTMDHQIIRA LFKACAETAG ILKTDAVFAQ
KLTETAKQIA PNQIGRHGQL QEWMTDIDDT TNHHRHVSHL WGVYPGEEIT PTGTPDLLKA
AIKSLEYRGD DGTGWSLAWK INYWARFLDG EHAYTMIRKL FNPVFESGRK MSGGGSYPNL
FDAHPPFQID GNFGGASGIL ETLVQSHLGE INLLPALPKA LPDGRVSGLC ARGGFEMDMD
WKNGKLTGLS IRSKAGNECK VRYGAQVISI PTEKGKTYRF GPDLKVLK
|
|---|
| |