Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_1167 |
Symbol | |
ID | 8224738 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 1391004 |
End bp | 1391924 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644929029 |
Product | Xylose isomerase domain protein TIM barrel |
Protein accession | YP_003085581 |
Protein GI | 255034960 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.100222 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCAAAT TAGGTTTTAA TAGTGCGATC CTGGCCGATT TTGGCTTCGA ACATGTCGTT CAATTCGCTG GAAATAATGG CTTTTCTTGT GTAGAAATGA TGTGCTGGCC GGCCGACAAT GCCGATAGCC GCCGGTATGC GGGCGTTACC CACATCGACG TCAATAATCT GACCGACCAG AAGGTCTCCG CCATCAGGCA CCAGCTGAAA GAGGCGGGTA TATTCATCTC GGCCCTGGGC TACTATCCCA ACCCGCTCGA CCCGGACCCC AACCGCTCCG AATATTATAT CGAACACATC AAACAGGTAA TCCGTGGCGC CGCGAAGCTC GACATCCCGG TGGTGACAAC ATTCATCGGC CGCGACCCGT CCAAAAGCAT TAAGGATAAC CTGGCCCGCT TCGCCGATGT GTGGCCGTCT ATCATGAAGG TTGCCGAAGA GAATAATGTG AAAATAGGCA TCGAAAACTG CCCGATGTTC TTTACCGACG ATGAATGGCC GGGAGGCAAA AACCTGGCGA TCAGCCCGGC GGTGTGGGAC AGGATGTTCG AAATCATTCC AGATCCATTA TTCGGACTGA ACTACGATCC GTCGCATATG ATCTGGCAAA TGATGGATGA ATTGCTACCG ATTTACAATT ATAAATCAAG GCTACATCAT GTGCATTTGA AGGATGCGAA AGTTTATAAG AATAAATTGA ATAATGTAGG CATTATGGCA AACCCCTTGG AATACCATTC GCCCAAACTT CCCGGCCTCG GAGATGTAAA CTGGCGCGGT TTCTTCGCCG CATTAACAGA CGTGCGCTAT CGCGGGCCAG TCGTGATTGA GGTCGAAGAC AAGGCTTACG AAAGCAATAT AACCGACGTT AAAAGCGCGA TCCTTACGAG CCGTAACTAC GTTAGTCAGT TCCTGGGGTA G
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Protein sequence | MLKLGFNSAI LADFGFEHVV QFAGNNGFSC VEMMCWPADN ADSRRYAGVT HIDVNNLTDQ KVSAIRHQLK EAGIFISALG YYPNPLDPDP NRSEYYIEHI KQVIRGAAKL DIPVVTTFIG RDPSKSIKDN LARFADVWPS IMKVAEENNV KIGIENCPMF FTDDEWPGGK NLAISPAVWD RMFEIIPDPL FGLNYDPSHM IWQMMDELLP IYNYKSRLHH VHLKDAKVYK NKLNNVGIMA NPLEYHSPKL PGLGDVNWRG FFAALTDVRY RGPVVIEVED KAYESNITDV KSAILTSRNY VSQFLG
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