| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1112 |
|---|
| Symbol | |
|---|
| ID | 8224683 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 1327208 |
|---|
| End bp | 1328569 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 644928974 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_003085526 |
|---|
| Protein GI | 255034905 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0613673 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.382765 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATTTTA TCGTAGCCTT CTTTCTCGTC CAATTCGCCC AGCAGGCGAT GCAGCATACC
GATCAGCGGC CCAAATGGGA GAACTTCTTC AAATATGCAC GCTACTACGT GTTTATCCTG
CTGGGGGTGT ATTACGTGGC CAGGCAACCG GAAATGTTCA CTTGGGTATG GAATCTTTCG
TTGATCGGAC TGCTGGCGAT ATTTTACAAG GAGGAAGATT TCAGGTCGAT CCGCACATTG
GTGCAGTCGA TCGTGCCGTT TGTGGGCGTG TCGATGCTCA GTGATTTCTT CAAGCTCGTG
TTGCCCAAGT TTCATGACGA GTACGACGAT TTTTTCGGCA TGGCCATTCT CTTCGCCTGG
CTTTTCTGCT TTGTGATATG GATTTATGCC AAAAAGCAGC AGAAAGTGCT GGCACAGGAA
CGCCGCGACA GGATTCGTGA CGAAGAAATC GCCCGGGAGC AGCGGCAATC ATTGGAATAC
CTCGTAGCCG AGCGTACCCA CGAACTGACG CAGCAGAAAG AAGAATTGCA AAAGGCCATC
GAAGAACTGA AAGCCACTCA AAACCAGCTG ATCCAGAGTG AAAAAATGGC TTCGCTCGGC
GAGCTTACCG CCGGCATCGC GCACGAAATC CAGAATCCTT TGAACTTTGT TAATAATTTC
TCCGAAGTGT CCGTGGAGCT TTGCCAGGAG TTGGAGGAGG AGATTGAAAA AACGGGCATT
GCAGACGACG ATAAGGACTA TATCAAGGGC ATTATCGCCG ATTTGAGCCA AAATCAGCAG
AAAATCACGC ACCACGGCAA ACGCGCCGAT TCGATCGTGA AAGGAATGCT GCAACATTCG
CGGGTGTCGT CGGGCGAGAA GGAGCCGGTG GAGGTGAATG CGCTCGCGGA CGAGTACATG
CGCCTCGCTT ACCACGGCCT GCGCGCGAAG GACAAGGAGT TCAATGCCGC GCTCGTGACC
GATTTTGACC CGACGATCGG AACGGTAAAT GTGCTCCCGC AGGATCTGGG CCGCGTTTTT
CTCAACCTTT TTACCAATGC TTTCTACGCG GTTTCCGAGA AAAAACGGCG GCTTAGCGAG
GCCGGCCAGC TGGGAGATTA CAAGCCGGAG GTAAGAATTA GTACCAAAAA ATTTGATAAT
AAGCTCTATA TCAGGGTGTC GGATAACGGA ACGGGCATGC CGGAGCATGT GAAAGCGAAG
ATTTTTCAGC CGTTTTTCAC CACCAAGCCG ACGGGCCAGG GCACCGGTCT GGGCCTCTCG
ATGAGCTACG ACATCATCAC CAACGGCCAC GGCGGCGTGC TCGAAGTGGA CACGGTGGAA
GGGGAAAAGA CCGAATTCCG CATCACAATT CCCGCTGCCT GA
|
|---|
| Protein sequence | MHFIVAFFLV QFAQQAMQHT DQRPKWENFF KYARYYVFIL LGVYYVARQP EMFTWVWNLS
LIGLLAIFYK EEDFRSIRTL VQSIVPFVGV SMLSDFFKLV LPKFHDEYDD FFGMAILFAW
LFCFVIWIYA KKQQKVLAQE RRDRIRDEEI AREQRQSLEY LVAERTHELT QQKEELQKAI
EELKATQNQL IQSEKMASLG ELTAGIAHEI QNPLNFVNNF SEVSVELCQE LEEEIEKTGI
ADDDKDYIKG IIADLSQNQQ KITHHGKRAD SIVKGMLQHS RVSSGEKEPV EVNALADEYM
RLAYHGLRAK DKEFNAALVT DFDPTIGTVN VLPQDLGRVF LNLFTNAFYA VSEKKRRLSE
AGQLGDYKPE VRISTKKFDN KLYIRVSDNG TGMPEHVKAK IFQPFFTTKP TGQGTGLGLS
MSYDIITNGH GGVLEVDTVE GEKTEFRITI PAA
|
|---|
| |