Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_1059 |
Symbol | |
ID | 8224629 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 1255767 |
End bp | 1257263 |
Gene Length | 1497 bp |
Protein Length | 498 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644928920 |
Product | permease YjgP/YjgQ family protein |
Protein accession | YP_003085473 |
Protein GI | 255034852 |
COG category | [R] General function prediction only |
COG ID | [COG0795] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.546166 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.553848 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGC TGGATAAGCT TATTTTAACG TCCTTTTGGG GACCTTTTGT GATTACAATG TCGGTCGTGG TGTTCGTCTT TCTGATGCGG ATCATGATCT TTTATATAGA TGACTTCGTG TCCAAAGACC TGAATGTCAT GGACTATGCA CAGCTATTCT TCTTTTTCAG CCTCATTACC GTTCCCACGG CACTGCCGCT CGCAATGCTG CTTTCCTCGC TGATGGCATT CGGTAACCTG GGCGAATTCT TTGAGCTTAC GGCCATCAAA AGTGCTGGTA TTTCGGTGGT GCGGGCCATG GCGCCGTTGT TCATCGTAGC CGTCGGGATC AGCGTTTTTT CCTTTTATTT CAATGATAGG GTGTCGCCCT GGGCCAATTT GAAGGGTTAT AGCCTGCTCT ACGATATCAA AACGACCAAG GCGACGCTGA AAATCAAGGA AGGGATTTTT TATAATGACC TGCCGGGATA TAGTATCAAA GTGGACGAAA AGCTAGAAAA TGGCAAGATG ACCGGCATGG TGATCTACAA GCACAACAGC CGGTCGTACG AGTTCGGGAA TACGGAAATC ATCCTCGCCG ACTCGGGCAG AATGTATTCG ATTAATGAGA ACCGTTACCT GGTGATTGAG CTTTACAACG GTACACGCTA CACGGACGAG CAGGGCTCGG CAAGTTCGCG GCCCGTTTAC ATTTCGTCGC CCGCCGGCAC CCAAACGCCT TACTCGAATT TCAACCGGCA GTCGTTCAGG CATTACCGGA TGACGGAAAG CCTCGCTTCT TTTGGGATGA AACGTACGGA CGAAGGGCAG TTTAAGTACC ACGAGTTCAT GAAGAACATC AGCGACCTCA CGCACACGGC CGATTCGCTG CGCACTTCAT ACCAGGAAAC GAAGAAAAAC CTTGTGTCGG GTAGTCAGCA ATATTACTCG TACAACTATC GGGAGGGGAC TGACAAGACG ATCAAGCCTG GCAAATGGAT CGATTCGCTG GTGACCCGGC CGGTTTCGGA TAGTTTGAAG AAAGAAATCC TGACGAACAC AAAAGCGGCG TCGAACAGCA TGCTGAGCTA CATCAAGTCG CAGCAGGATT ACCTGCAAAC GAAGCTGAAA GACGCGAGCA AATACGAGCT CGAAAAGCAT CACAAATACA CCCAGGCACT TTCCTGCCTG ATCATGTTTC TCATCGGCGC GCCGCTGGGG GCCATTATCA AGAAAGGAGG CTTCGGCGTG CCGGTGCTGG TTTCGATTTT GTTCTTTATC CTATTGTATG TTTTGACTAA CCAGGGGGAC AAATGGGTGA AGGAAGGGCT GGTAGCCGTG CCGGTGGGCG CGTGGATGGC GAATACCATT CTCTTTTTGA CAGGTATGTA TTTCATCGAT CGCGCACGCA GCGATTCCCG GCTGTTCGAA AAGGACGTGT ATCAGATGTT CTTCAAAAGA ATTAAGTCGA AATGGGCAAG TAGATTTGGC AAAAGGGAGC TTATCACTCA TAATTAA
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Protein sequence | MKKLDKLILT SFWGPFVITM SVVVFVFLMR IMIFYIDDFV SKDLNVMDYA QLFFFFSLIT VPTALPLAML LSSLMAFGNL GEFFELTAIK SAGISVVRAM APLFIVAVGI SVFSFYFNDR VSPWANLKGY SLLYDIKTTK ATLKIKEGIF YNDLPGYSIK VDEKLENGKM TGMVIYKHNS RSYEFGNTEI ILADSGRMYS INENRYLVIE LYNGTRYTDE QGSASSRPVY ISSPAGTQTP YSNFNRQSFR HYRMTESLAS FGMKRTDEGQ FKYHEFMKNI SDLTHTADSL RTSYQETKKN LVSGSQQYYS YNYREGTDKT IKPGKWIDSL VTRPVSDSLK KEILTNTKAA SNSMLSYIKS QQDYLQTKLK DASKYELEKH HKYTQALSCL IMFLIGAPLG AIIKKGGFGV PVLVSILFFI LLYVLTNQGD KWVKEGLVAV PVGAWMANTI LFLTGMYFID RARSDSRLFE KDVYQMFFKR IKSKWASRFG KRELITHN
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