| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1001 |
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| Symbol | |
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| ID | 8224571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 1170513 |
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| End bp | 1171556 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644928862 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003085415 |
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| Protein GI | 255034794 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.612781 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0455845 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCTA CCACACATCC GATCATATAT GCGTACGTAC TCGCGGCCGC GCTCTTCACG
TCTGCGTGCA AGGAAGAAAA GAAGCCGGAG AAAACCGACG ACACCATTCC CGTAAAGATC
ATCAGCTCGG CGGCATTAAC CCAGGCGCAG GCCGTGGAAA CATCCGGCCT GCTCGGTTCG
GAAAATGAAG CCCGGCTATC GTTCAAAATC GGGGGGATTA TCAAAGATAT TTTGGTAAAA
GAAGGCGACA AGGTGCGGAG AGGGCAGCTT CTGGCATCGC TCAACACCAC GGAAATAGCC
GCCCAGATGG GTCAGGCCGA AGAGAACTTC CTGAAAGCAC AGCGCGATGC ACGTCGGGTC
CAAAATCTCT ACCGCGATAG CGTGGCTACG AAAGAACAGC TCGAAAACAC CCAAAGTGCA
TTGGTACTCG CTGAAAAACA GCTCGATATC GTCAAATTTA ACTTGTCGCA AACGAAGATA
TTCTCCACTG CCGACGGTGT GGTAATGCAG AAATTGCAGA ACGCCGGCGA GCAGGTGCAG
GGCGGCACGC CGGTGCTGCA TGTGAGCAGC ACAAGCAGCA CCGACTGGGT GGTGAAATGC
GGCCTCACCG ACAAGGACTG GGCCCGGCTG AAAGGGGGCG AACAAGCGGA AATTACCTTC
GACGCCTACC CGCAGACATT TATAGGCCGG GTGAAAACCC TCGCGCAGGT GAGCGACGCG
GTTTCGGGGC TATACCAGGT TGAAATTGCG CTGAATAAAC CCGCAGCGAG GCTCGCCAGC
GGCCTTTTTG CCAAAGTGCA CATTTACCCG AAAGAACAAA CGAGCATGGT GTCCATCCCC
GTGGACGCAT TGATCGAAGG CGAGAACGAC AGCGCATTCG TGTTTGTGGC GGATGGAAAC
CGTGCACAGA AAAAGCGCGT GAAAGTGGCA TTCCTGGAAG GCGACAAGGC ATTTATCCTG
GCCGGTATCG GTGCCGGCGC GCGCGTGATC CGCGAAGGAT CGGCTTACCT GGCCGAAGGT
TCGGCGATTA GAGTAGTTCA GTAA
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| Protein sequence | MKATTHPIIY AYVLAAALFT SACKEEKKPE KTDDTIPVKI ISSAALTQAQ AVETSGLLGS
ENEARLSFKI GGIIKDILVK EGDKVRRGQL LASLNTTEIA AQMGQAEENF LKAQRDARRV
QNLYRDSVAT KEQLENTQSA LVLAEKQLDI VKFNLSQTKI FSTADGVVMQ KLQNAGEQVQ
GGTPVLHVSS TSSTDWVVKC GLTDKDWARL KGGEQAEITF DAYPQTFIGR VKTLAQVSDA
VSGLYQVEIA LNKPAARLAS GLFAKVHIYP KEQTSMVSIP VDALIEGEND SAFVFVADGN
RAQKKRVKVA FLEGDKAFIL AGIGAGARVI REGSAYLAEG SAIRVVQ
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