Gene Dfer_0999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0999 
Symbol 
ID8224569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand+ 
Start bp1168473 
End bp1169087 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content49% 
IMG OID644928860 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003085413 
Protein GI255034792 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.372995 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0457994 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATTA AGGAAAGAAA AGAGCGGGAG AAGCAGGAAA TGAGGAATCT GATTATCGAA 
TCGGCGACCA GGATGTTTTT AAAGCAAGGT TACGACAAGA CGTCCATTCG TAACATTGCC 
GAGGATATCG AGTACAGTCC TGCTACGATC TATCTGTATT TCAAGGATAA GGATGAAATT 
TTTTATGTAA TCCACGAGAA TGCGTTCGAT ATCCTGGATA AGCATTTGCG GCAGCACGAT 
GTGATTGCCG ACCCGTTTGA AAGGCTCGCG GCGCTGGGCA AAACGTACAT TGAATTTGGG 
CTTTCCAACC CCGACTATTA CGATCTGATG TTCATCATGC GCGCGCCGAT GGAGCAGATC 
AAAAACGAGG AAAAGTGGAA AGCCGGCGAG TGCGCGTTCG GATATCTGAT CACAACGCTG 
GCAGCTTGTC TGGAACAGGG CAAGATCCGC CAGGCCGATT TACACGTGAC GGCAATCCAG 
GTGTGGTCGT ATGTGCACGG GCTAGTATCG CTCTATGTTC GCGAGCGCAT GTGCATTTTG 
ATGCTGCCCG ACGACGCCAC GCGGCAGATG TTGTACCATT CGTTCGATCT TTTTTTAGCT 
AATATCAAAA CCTAA
 
Protein sequence
MAIKERKERE KQEMRNLIIE SATRMFLKQG YDKTSIRNIA EDIEYSPATI YLYFKDKDEI 
FYVIHENAFD ILDKHLRQHD VIADPFERLA ALGKTYIEFG LSNPDYYDLM FIMRAPMEQI 
KNEEKWKAGE CAFGYLITTL AACLEQGKIR QADLHVTAIQ VWSYVHGLVS LYVRERMCIL 
MLPDDATRQM LYHSFDLFLA NIKT