Gene Dfer_0915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0915 
Symbol 
ID8224484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1073210 
End bp1073626 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content48% 
IMG OID644928779 
Productprotein of unknown function DUF1486 
Protein accessionYP_003085333 
Protein GI255034712 
COG category[R] General function prediction only 
COG ID[COG5485] Predicted ester cyclase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.282506 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0578966 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGAAA CAATGACCGA AAACAAAGCA GTCGTCCGCC GCTTCAACGA GGAAGTAATC 
GCCGAAGGTA ATCTTGAAAG CTTCAAGGAG TTGATGGACG AACAATTTAT CAATCGCTCT
GCACCTGAGG GTATGGATAA CGGCCCGGCA GGTATGATTT ACTTTTTCAA TGAAATTCTC
CGCCCTGCAA TGCCAGATAT CCATGTGACA ATCCACCAGC AGGTTGCCGA AGGCGACTTG
GTTACAACGC GAAAAACGAT TAGCGGAACC CAAACCGGAG CCCTCTTAGG TATTCCGGCG
ACGGGTCGGG CGGTTAACAT TGACGTGATT GATATCGTCA GGGTAAAAGA CGGCAAGTAT
TTTGAACACT GGGGGATCAC CTCGCTCCCG GAGGTATTAT CTCAACTTCA AAACTAG
 
Protein sequence
MMETMTENKA VVRRFNEEVI AEGNLESFKE LMDEQFINRS APEGMDNGPA GMIYFFNEIL 
RPAMPDIHVT IHQQVAEGDL VTTRKTISGT QTGALLGIPA TGRAVNIDVI DIVRVKDGKY
FEHWGITSLP EVLSQLQN