| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0794 |
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| Symbol | |
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| ID | 8224363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 936828 |
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| End bp | 938786 |
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| Gene Length | 1959 bp |
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| Protein Length | 652 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644928665 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003085219 |
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| Protein GI | 255034598 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00512087 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.040837 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAAC ACATTCAATA TTTAAGCCTT CGCAGCCTGG TGCTGCTGAT GCTTCTTTCG
GTAGGGTGTA CAGATATTTT AGAGGAAAAA CCGCGGGCTA TTTATACACC GGATTATTTT
AAAACTGAAA AGGGAGTTTA TGGCGGCCTC ACAGGTATGT ATGCGCACCT GAGATGGATC
TTCGGCAATG CCTATTATTA CAACTCCTGC ATGACCGGAA CGGATGAAGC GACCTGGGGA
GCAAGCGGCG GCGGCAGCGG ATTTCAGATC CATGACCTGT CGGGCGGGGG CCTGATCATG
CCTACCAACA GTGACGCGAG CAACGTCTGG TACAATGCTT TTCCCAACAT CAACACAGCC
AATGGCGTAA TCGAGAATGC CACCGCCGTG GGGATTTCTC CGGCGCTGAT TGCGGAGGCA
CGTTTCTTCC GGGCATTCGA CTACTTTTTG CTGGTGCAGG CATTTGGCGG CGTGCCGCTC
GATCTGGGCT CGGGAGAGCT GGCGTTCAAT ATTTCTACCC TGAGGACATC CGTGCGGAAC
ACAGTGCCGG AAGTGTACAC CAGAGCCATT TTCCCCGATC TCGCCAAGGC GGTCAGTGAC
CTTCCTGCCA CAGGGCGGGT AAAGGGAGGC GTGACCAAGA CGCTGGCCCG GCTATACCTG
GCGAAAGCTT ACCTGACCTA CGGATGGTGG CTTGAAAACC CCGGGAACAT TCCCACTTAT
CCGGAAACCG CCCGCACCGA CCCTGACGGC CACAATGCCC AGTGGTACTT TCAAAAGGCT
TACGATCTTG CCGTAGAAGC AATCGATGAT CCGGGTCCGT TTAAATTGCA GGATACCTAT
TACGATGTGA ACCTGGGCTC CAATGACCGG AACAGCGAAA TGCTGCTCTA TGCGGATCAC
ACCGAAACCA GCGAGCTTTA CAACGGTTCG AGCCTGACTT ATGCCAATGG CGGTGATGCG
GACAACTTTG CAGTGTGGAT GCTGACATGG AACTACACCA GTATTACCAG TTCAAAGACC
AACTGGAGCG CCCCGACCAC GGTTAACTCG GTTCAGCGCG AGGCTGCCCA GGCCCTGGGA
CGTCCCTGGG TGAGGATGGC GCCGCCGCAC GAAGTTTTCA AGCATACATT CGCCGACAAA
ACCAACGATT CCCGTTACGA CGGCACATTT ACGACTGCCT ACCGCGGCAA CTGGCCGAAG
GCAGGCGTGA CCAATGAGTT TTTGTACAAT GCAAACAACC TGCAGGTACG GCCGGGCGAA
GCCATTCTCA CGTTCCTGAA TGAGGACCCC GCTCAGGCGA TTGATTATTC CAACACCGTT
TACAAGAGCG GAATGGGCCT TGGCGTAATG CCGGGCAGGG CTGACTACGT GGTTGCGCCG
AGTGCGATCA GCAGGCTTGT TTATCCGGGT TTATGGAAAT TAGGCACTTA TCGAACCGAT
AATGGAACGG GCCTGGGCCA GCCCAATGCG GCCAATACGC GTCCGTTCAA CATCGCCAAA
TTCTCTGAGC TGTATTTCAT CGCTGCCGAG GCGGCCGTTA AAGGCGCTTC TACGCAGGGC
GGGAAGACGG CCCGTGACCT GATCAACGTG ATTCGCGCAC GTGCTGGCAA ATGGCGCTGG
AACAACCAGG GTAATGTCGA GAAAATTGCC GATAACAGCG CGGCCATGAT CGCCGCGACG
CCTGCCGCCA TCACCATTAA TTATATTCTG GCGGAACGCT CCCGCGAATA CTATGGCGAA
GGATACCGCT GGTATGACCT GGTTCGTACG CAAACCTGGA AAGAGCTGGG AGCGAGCTAC
ACGATCTGCG GCCCGAGAGT AGGAGACCAT ACGCCGGTCA CTTTTAAGAG AACGATCGAG
AACTATCATT TTCTCCGGCC GATCCCGCAG GGACAGCTTG ATAACCTGGA CATTACTGCC
GAGCAGAAAG CGGCTTATCA GAATCCGGGC TATTTGTAA
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| Protein sequence | MMKHIQYLSL RSLVLLMLLS VGCTDILEEK PRAIYTPDYF KTEKGVYGGL TGMYAHLRWI
FGNAYYYNSC MTGTDEATWG ASGGGSGFQI HDLSGGGLIM PTNSDASNVW YNAFPNINTA
NGVIENATAV GISPALIAEA RFFRAFDYFL LVQAFGGVPL DLGSGELAFN ISTLRTSVRN
TVPEVYTRAI FPDLAKAVSD LPATGRVKGG VTKTLARLYL AKAYLTYGWW LENPGNIPTY
PETARTDPDG HNAQWYFQKA YDLAVEAIDD PGPFKLQDTY YDVNLGSNDR NSEMLLYADH
TETSELYNGS SLTYANGGDA DNFAVWMLTW NYTSITSSKT NWSAPTTVNS VQREAAQALG
RPWVRMAPPH EVFKHTFADK TNDSRYDGTF TTAYRGNWPK AGVTNEFLYN ANNLQVRPGE
AILTFLNEDP AQAIDYSNTV YKSGMGLGVM PGRADYVVAP SAISRLVYPG LWKLGTYRTD
NGTGLGQPNA ANTRPFNIAK FSELYFIAAE AAVKGASTQG GKTARDLINV IRARAGKWRW
NNQGNVEKIA DNSAAMIAAT PAAITINYIL AERSREYYGE GYRWYDLVRT QTWKELGASY
TICGPRVGDH TPVTFKRTIE NYHFLRPIPQ GQLDNLDITA EQKAAYQNPG YL
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