Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_0724 |
Symbol | |
ID | 8224293 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 862331 |
End bp | 862963 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644928597 |
Product | two component transcriptional regulator, LuxR family |
Protein accession | YP_003085151 |
Protein GI | 255034530 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.836709 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATCTA GGATCATCGT TTTCGACGAC AACCAGGAAA GGCTTAACAG CGTAGCCATG CTTCTGAACC TCTCCGCCGA CTTTATTTGC GCCGGCACAT TTCCCAATGC CGGCAACCTC GTCGCCGACA TCACCGCCTC GAAACCGGAC CTGGTGCTGA TGGACATTGA TATGCCCGGC CTGGACGGCA TTGAAGCCAC TAGGCTCGTC CGCAAGCATT TCGATGCATT GCCGGTGCTC ATCCAAACCA ATTTCGAAGA AGATGACCGG ATATTCGGCA GTCTGAGGGC CGGCGCGAAC GGTTATCTGC TCAAAAAAAC GAGCCCCGAA CGATTTCTTG AAAGCCTGCG GGAGGCGCTC GACGGCGGCG CTCCCATGAC CGGCAGCATC GCCGCGAGGG TACTGCGGCA CTTTTCGGCC GAGAGCGAGG CGAAAAAGGA TTATCACCTT ACCGAACGCG AAAAACAGAT TCTGGGCTTT TTGGTAAAAG GATACAGCTA CAAGCTCATT GCCGCGGAAT GCACCATTTC CTACAATACC GTGAACAACC ACATCCGAAA TATTTACGAC AAATTGTACG TAAACAGCGC CACGGAGGCT GTGAGCCTGG CCATTAAGGA AAGGCTGGTG TAA
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Protein sequence | MTSRIIVFDD NQERLNSVAM LLNLSADFIC AGTFPNAGNL VADITASKPD LVLMDIDMPG LDGIEATRLV RKHFDALPVL IQTNFEEDDR IFGSLRAGAN GYLLKKTSPE RFLESLREAL DGGAPMTGSI AARVLRHFSA ESEAKKDYHL TEREKQILGF LVKGYSYKLI AAECTISYNT VNNHIRNIYD KLYVNSATEA VSLAIKERLV
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