Gene Dfer_0653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0653 
Symbol 
ID8224222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp759402 
End bp760334 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content56% 
IMG OID644928526 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003085080 
Protein GI255034459 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.754721 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0538261 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAGC AGATTCTCAA CATCCTGGTA CTCGCGGTAG CCTTATTCGC AGTATCCTGT 
CAGCAAAAAC CCAAGGAAGA ACAAAACGAG GCCTCCGGCG CAAAGGGTAC AACCGCCGGC
ACTCCCGCCA AGCCGTCGCA AAGCGGCTAT GCGGAGGTAA ACGGTTTGAA AATGTATTAC
GAAGTTTATG GAAAGGGCAA GCCGATCGTG CTCGTCCATG GCTCGTTCAT GAACATCCCG
TCCAACTGGG CCCACATCAT CCCGATGCTG GGCGACAGGC AGGTGATCGT CGCGGAAATG
CAGGCGCATG GCCGCACCCG CGACATTGCC CGCCCGCTGA GCTATGAGGG CATGGCCGAC
GATGTTTCGG GCCTGCTCAA ACACCTGCGC GTGGACAGTG CCGATATACT TGGTTACAGC
ATGGGCGGCG GCGTCGCTTT CCAGCTCGCC ATTCGCCATC CCGAGCAGGT GCGCAGGCTT
GTGATCCTTT CGGGGACCTA TGCCCACGAC GGCTGGTGGC CCGACGCCGA GGCTAGTTTC
TCGACCATCA CCGCGGATAT GTTCAAAGGC ACACCGATCC AGACGCAATT CGACAGCCTG
GGCAACGATC CAGCCAAATT TCCCGATTTT ATTAAAAAGG TGATTAGTAT TGATTTGAAA
CCTTATGACT GGTCGAAAGA CGCCAAAAAC ATTAAGGTAC CGTTGTTCAT GGCTATCGGC
GATGCCGACG GCGTCCGGTA TGAGCACGCA CTGGAACTCT TTCGTGCCAA AGGCGGCGGA
AAAATGGGTG AAATGCATGG GTTGCCCAAA TCGCGGCTTG CTATTCTGCC CGGCACCACG
CACATTGGCA TGATACAGCG GACCGACTGG CTCGTGCCGA TGGTCACCGA TTTTCTGGAT
TCGGATCTCA ATCCAACGCC GCCGATGATG TAA
 
Protein sequence
MNKQILNILV LAVALFAVSC QQKPKEEQNE ASGAKGTTAG TPAKPSQSGY AEVNGLKMYY 
EVYGKGKPIV LVHGSFMNIP SNWAHIIPML GDRQVIVAEM QAHGRTRDIA RPLSYEGMAD
DVSGLLKHLR VDSADILGYS MGGGVAFQLA IRHPEQVRRL VILSGTYAHD GWWPDAEASF
STITADMFKG TPIQTQFDSL GNDPAKFPDF IKKVISIDLK PYDWSKDAKN IKVPLFMAIG
DADGVRYEHA LELFRAKGGG KMGEMHGLPK SRLAILPGTT HIGMIQRTDW LVPMVTDFLD
SDLNPTPPMM