| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0613 |
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| Symbol | |
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| ID | 8224182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 697980 |
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| End bp | 701159 |
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| Gene Length | 3180 bp |
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| Protein Length | 1059 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644928488 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003085042 |
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| Protein GI | 255034421 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACGA GATTTATGTA CCTCATTCTG GTGACCTTAC TTGCGACCGG GCTCGTGCAT
GCACAGCAGC GGACCATTAC CGGTACGGTT ACCGACGCCA ACGACGCGAG CGGACTTCCC
GGCGCCTCGG TTACCATTAA AGGGACTTCC ACAGGCACCC TCACCGACGC CAACGGCGGT
TTCAGCCTGG ACGTCAGCGG CGAATCGCCC GTGCTGGTGG TTTCCTTCAT TGGCTACATC
AACCAGGAAA TAGCAGTAGG CAACAGCGAT AAAATCAATG TGGCCTTGAA GCAAGACGCC
AAGATCCTGA ACGAAGTGGT GGTAACGGCC CTCGGCATTT CCCGCGAGAA GCGCGCGCTC
GGTTATGCCG TGCAGGAAGT AAAAGGTGAA GCATTGCAAA CACGCCCTAC CAACGCGCTG
AGCGCATTAT CGGGCCGGGT TGCGGGTATG CAGGTGGTGT CGTCCGGTGG TAACATGGGC
GGATCGTCGC GCGTGCTCCT CCGTGGTATC AACTCCATTT CGGGCAATAA CCAGCCTTTG
TACGTGATCG ACGGCACGCC GATCGACAAT GCCGACCTCA ACAGCGCGGC TACGAGCGCG
GGAAGCGGCG GCAAGGACGT GGGTAACATG ATCCAGGACC TTAACCCGGA CGATATTGAG
AACATTTCGG TGCTCAAAGG ACCATCCGCA GCGGCGCTTT ACGGTACCCG TGCCGCCAAC
GGCGTGATCC TGATCACCAC CAAAAAAGGC AAGGAAAACA GCAAAGTGAA CGTGACGCTG
AATACCGGCG TGGAGTTTGA GAACATTGTA CGTCTGCCGA AACGCCAGAA ACTCTACGGA
GGCGGCTTTT CGAGCACTTT CCAGAAAGCC AACATCGGCG GAAACGATTA CAATATTGTA
GAATATGCAG TGGATGAAAG CTGGGGGCCC AAGCTCGACG GTACGCCGGT ATTGCATTGG
TATAACCTCG ATCCTGAAAA TACTGCGGAG TACCTGAAAC CGCAGCCGTG GATTTACCCT
AAAAACGACG TCCACACGTT CTTTGAAACA GGCGTGGCGA ATACAAACAG CCTGGCCGTG
AGCGGCGGTA ATGCCAACTC GACCTACCGC ATTTCATTTA CCAATAAAAA TGTAAAAGGT
ACGGTCCCGA ATTCATCCCT GAAACGTAAC TCGATCAACT TTTCCGGTTC GACGCAGGCG
GGCAAGTTTA AGTTTTACAA CAACTTTAAT TATATCAAAA ACCAATCGAC CGGCCGGCCG
TGGACGGGTG CTACCAACCG GAACATCATC CTCGAAGCAT TCCAGTGGGG ACAGGTGCAG
GTGGATTACG ATAAGCTGAA AAACTATAAG CGCGCCGACG GCAGCCAGAT CCTCTGGAAC
CGCAGCGGCT ACCAGGACAA CCCGGCGGGT GAAGCGGCGA AGTTCATCGA TAACCCGTAC
TGGTCGGCGT ACCAAAGCTA CCTCGAAGAG AACCGCGACC GCTTTTACGG CAACGTAGGC
GTGGTTTACG ATGTGAACAG CTGGCTGAAA GTGAGCGGAA AAGTGAATGC GGATGTTTAT
CAATACCAAT ACCAGGACCG CATTGCCGTG TATTCGCGGA CACAATCGCA ATACCAGGAG
TATAACAACA ATTTCAGCGA GTTCAACTAC GAATTGCTTG CATCAGCCAA TAAGAGCTGG
GGCGACATTT CCTTGAACGT GAATGCGGGT GGTAACATCA TGAGTCAGCG CCGCCGGATC
AGTGACGCCG TAACCCAAGG CGGATTGATC ATTCCGGAGT ATTACAACTT AAAGAATGCG
AGCTCGGTAC TTGTGAACTC GAATGCGTAC CGTAAGCAGA TCAGCTCGAT CTTTGGTAGC
TTCTCGCTGG GCTGGAAGAG CCTGTTGTTC CTCGATGGTA CGCTGCGTAA CGACTGGTCG
TCCACCCTGC CATTGAACCG CAACTCATTC GCATACCCTT CACTAACAAC GAGTTTGATC
CTCAGCGAAC TCAATGGCGT GAAAGACATC GGCTGGCTCG ATTTTGCGAA AGTACGCCTC
GGCTGGGCGC AGGTGGGTAA CGACACCGAC CCTTACCAGC TGCAACGTGC CTACGAAGCG
AGCCAATCGT TCGACGGCCT GCCGTCCTAC AAACTGCCTG CGCAGCTGAA CAACCAGTTC
CTCAAACCGG AGATTACCAG CTCCTGGGAA GCGGGGTTGA ACATCCAGGC ATTGAAAAAC
CGCGTGGGCC TCGACATTAC CTATTATGAC AACGTGAGCC GCAACCAGAT CATCAACATC
CCGGTATCGT CGGCATTCGG ATATGATTCG AAGGTGATCA ATGCAGGAAA GATTAATAAC
AAGGGTATTG AACTGACATT GAGCGGCACG CCGGTCCGTT CCAACGGATT TGAGTGGAAT
TCGAGCCTCA ATTGGTCGAG AAACCGCAAC AAGGTGATCG AGCTCGCGCC GGGCATCAAC
ACATTCCAGC TTGCCAACAG CCTCGTGACC CTGGTGGCAC GCGAAGGCCA GCCTTACGGA
CAAATCCTCG GCAACGACTT CGTGTATGCT GCCGACGGAC AGAAGGTGAT CAAAGCCGAC
GGAACTTATG AGCGCTCGCA GCAGCTCACC CCGCTGGGCA GCGTGCTGCC GAAATACCTC
TTCGGTTTCC AGAACAACTT CACGTACAAA AACTTCAACC TGGGCTTCCT CGTAGACGGA
CGCGTAGGCG GCAAGTTCTT CTCGCAAACC TACAAAGTGG CGATGTACGC AGGTGTACTG
GACAAAACGG CCGCCAACAA CATCCGCGAA ACCGGGGTGG TGCTCGACGG TGTGAAAGGA
AACGTTACCT ACAATGCCGA CGGAACTTAC TCGGTGGCCA ACACCACTCC GAACGACACG
CGCATTACCG CCCAGGCATG GGCCCGCGGC GAGTACAGCG GCCCTACCCC GCAAACGATC
TTCGACGCAA CGTTCGTGAA ACTGCGTGAA ATCACATTCG GGTACAACCT GGCGCTGAAC
AGCAAGGCCG TGAAGCAGGT TTATTTCGGG GTATACGGAC GTAACCTGGC CAATATTTAC
ACCGCCAGCA AATACATCGA CCCCGAATTC GCCAACAGCG GCGGCAACAT CCAGGGTATC
GAAGGCGGTA ACATTCCGGT TCCTGCGACC TACGGCCTGA ATGTAAACGT GAAGTTCTAA
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| Protein sequence | MKTRFMYLIL VTLLATGLVH AQQRTITGTV TDANDASGLP GASVTIKGTS TGTLTDANGG
FSLDVSGESP VLVVSFIGYI NQEIAVGNSD KINVALKQDA KILNEVVVTA LGISREKRAL
GYAVQEVKGE ALQTRPTNAL SALSGRVAGM QVVSSGGNMG GSSRVLLRGI NSISGNNQPL
YVIDGTPIDN ADLNSAATSA GSGGKDVGNM IQDLNPDDIE NISVLKGPSA AALYGTRAAN
GVILITTKKG KENSKVNVTL NTGVEFENIV RLPKRQKLYG GGFSSTFQKA NIGGNDYNIV
EYAVDESWGP KLDGTPVLHW YNLDPENTAE YLKPQPWIYP KNDVHTFFET GVANTNSLAV
SGGNANSTYR ISFTNKNVKG TVPNSSLKRN SINFSGSTQA GKFKFYNNFN YIKNQSTGRP
WTGATNRNII LEAFQWGQVQ VDYDKLKNYK RADGSQILWN RSGYQDNPAG EAAKFIDNPY
WSAYQSYLEE NRDRFYGNVG VVYDVNSWLK VSGKVNADVY QYQYQDRIAV YSRTQSQYQE
YNNNFSEFNY ELLASANKSW GDISLNVNAG GNIMSQRRRI SDAVTQGGLI IPEYYNLKNA
SSVLVNSNAY RKQISSIFGS FSLGWKSLLF LDGTLRNDWS STLPLNRNSF AYPSLTTSLI
LSELNGVKDI GWLDFAKVRL GWAQVGNDTD PYQLQRAYEA SQSFDGLPSY KLPAQLNNQF
LKPEITSSWE AGLNIQALKN RVGLDITYYD NVSRNQIINI PVSSAFGYDS KVINAGKINN
KGIELTLSGT PVRSNGFEWN SSLNWSRNRN KVIELAPGIN TFQLANSLVT LVAREGQPYG
QILGNDFVYA ADGQKVIKAD GTYERSQQLT PLGSVLPKYL FGFQNNFTYK NFNLGFLVDG
RVGGKFFSQT YKVAMYAGVL DKTAANNIRE TGVVLDGVKG NVTYNADGTY SVANTTPNDT
RITAQAWARG EYSGPTPQTI FDATFVKLRE ITFGYNLALN SKAVKQVYFG VYGRNLANIY
TASKYIDPEF ANSGGNIQGI EGGNIPVPAT YGLNVNVKF
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