| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0539 |
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| Symbol | |
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| ID | 8224106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 608349 |
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| End bp | 609659 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644928413 |
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| Product | integrase family protein |
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| Protein accession | YP_003084969 |
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| Protein GI | 255034348 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.19804 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGCA ATCAGAAACT TTCGATCCTC TTCTGGCTAT TCAAAGCCAA AGCAACGAAA
GACGGCAAAG CGCCGATTTA TGTCCGGATT ACCATCGATG GTCTGGATGA CGAAATTTCA
CTTGGCAAAA AAGTGCACCC CGACGACTGG TGCAACCAAA CCAAAAAAGT AACTGCCTCA
GGCATGGAGG CCAAACTGAT CAACATTGCC ATCGATCAGG CGCGCACCTC ACTAACTTCC
CAGTTCATGG TGCTGCAATC GCAGTTTGAA TGCATCACGC CTACTATGCT TAAAAACGTC
TTTAAAGGCA AAGCGGTCGA AGACAAAGAC GATGCTCACA AGCAAGGGTT AAAAAAGCAG
CAGACCCTGC TTCAAGCGTT CGACGAGCAC ATCGAGAAAT TTGAACTGTT GGTCCAGCGT
GGGATGCGTT CGGACAACAC ACTACGACAC TGGCGAAAAC TTAAACGGCA TGTTACCGCT
TTTATCAAGT TTCAATACAA AACATCGGAT CTGAAATTTT CAGAGCTATC CGGCCTGTTT
GCCGAAGAGT TTTACGAGTA TTTGACACTA CACAAGCCCA AACCGCTCGC TGAAGTATCT
GCCCGCAAGG ATGTGAAATG GACCAGGCAA ATAGTAAAAA TCGGCGTCAA GAAGGACTTC
ATAACACGCA ACCCGATGGA GGGTTTTAAA TGCTCGGGCG GTGATGTTGA AGTGATCCCA
CTGGAGTTCG AGCAGGTCGA GAGAATTCAT AGAAAGAAAT TGCATGTTAA ACGATTGGCG
GAGGTGCGCG ACGCATTCAT CTTTCAATGC TTTACCGGGT TTGCTTACCA GGATATCTAT
GGGCTGACGC GGGATAGCAT AAGGCTTGTC GGTGCGAAAA GGGAAAGGTG GCTCGTCCGG
AAACGCGGAA AAACACAGGT CGGTGAAATG GTACCCATAC TGCCGATTGT TGAAGAATTG
ATTGAAAAAT ACAAGGATCA TCCCTATTGT ATAGCCCACG ATAAATTGAT CCCAGTGAAC
AGCAATTTCA GGTATAATAC CTATTTGAAG GAGCTGGCGG ATATATGTAA CATCCGTGAT
ATCACCGGAA GCATCAGGAG ACTAGACACG CATGATGCCA GGCATTTTTT TGCTGATATG
ATGCTCAACA ACGGCGTGCC GTTAGAAGAC GTCAGCAAGA TGCTTGGTCA TAAAAACATT
AGAACAACGA TGCGTTATTG CCGGGTGAGA AAGTCACGCA TCAGCGAGAA TGTGGGGCTA
GTCAGGGATC GATTGTTTAC CAAAACCGGC AAGCTTCGGC AGGCCTCCTA A
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| Protein sequence | MKSNQKLSIL FWLFKAKATK DGKAPIYVRI TIDGLDDEIS LGKKVHPDDW CNQTKKVTAS
GMEAKLINIA IDQARTSLTS QFMVLQSQFE CITPTMLKNV FKGKAVEDKD DAHKQGLKKQ
QTLLQAFDEH IEKFELLVQR GMRSDNTLRH WRKLKRHVTA FIKFQYKTSD LKFSELSGLF
AEEFYEYLTL HKPKPLAEVS ARKDVKWTRQ IVKIGVKKDF ITRNPMEGFK CSGGDVEVIP
LEFEQVERIH RKKLHVKRLA EVRDAFIFQC FTGFAYQDIY GLTRDSIRLV GAKRERWLVR
KRGKTQVGEM VPILPIVEEL IEKYKDHPYC IAHDKLIPVN SNFRYNTYLK ELADICNIRD
ITGSIRRLDT HDARHFFADM MLNNGVPLED VSKMLGHKNI RTTMRYCRVR KSRISENVGL
VRDRLFTKTG KLRQAS
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