Gene Dfer_0519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0519 
Symbol 
ID8224086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp580553 
End bp581239 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content53% 
IMG OID644928395 
Productprotein of unknown function DUF421 
Protein accessionYP_003084951 
Protein GI255034330 
COG category[S] Function unknown 
COG ID[COG2323] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG AAGATATTAG GTTTGGCGAC TGGCAGCGCG TGTTTATCGG GGATGTTCCC 
GCCGCATTTT ACTGGGAAGT AGTCCTGCGA ATAGCCATTA TCTACCTGAT CCTGATGGTT
TCCATGCGGT TGATGGGCAA ACGAATGGCC TCGCAGCTCA GCCGGAACGA AATGATCGCG
CTCGTTTCAC TGGCAGCGGC TATCGGGGTT CCTCTGCAAG CACCGGACCG CGGTATACTT
GCCGCCGTCG TGATTGCGAT CGTGGTGGTT GCCATTCAGC AACTGGCAGC ATGGCTGGCA
AGCCGTAATC AAAAGCTTGA ATCGGTAACG CAGGGGGATA TGACGATTTT GGTCGCTGAC
GGCGTGATGC AATTGGACAA CATGCGTAAA ACCGGCATTT CGCGGGAACG CGCATTTGCA
CAACTGCGCA GCAATGGAGT CGTTCAACTC GGCCAGGTCA AGCGACTGTA TTTTGAGGCT
GGCGGTACTT TTACTTTTAT GAAGGAGGAT GACCCTTCGC CCGGGCTGGG TATTCTGCCC
GGGCATGATC ACCAGTTCGA ATTGCGCAGG TACCGTCCTT CGGACCGGAT GGTTTGTGAC
AAATGTGGCC TTGTCGCACC CTACCACGAT TATTCCGGCA ATTGTGTAAG GTGCGATGGG
GAAAAGATAG TGATGGCGGT AGCGTAA
 
Protein sequence
MKKEDIRFGD WQRVFIGDVP AAFYWEVVLR IAIIYLILMV SMRLMGKRMA SQLSRNEMIA 
LVSLAAAIGV PLQAPDRGIL AAVVIAIVVV AIQQLAAWLA SRNQKLESVT QGDMTILVAD
GVMQLDNMRK TGISRERAFA QLRSNGVVQL GQVKRLYFEA GGTFTFMKED DPSPGLGILP
GHDHQFELRR YRPSDRMVCD KCGLVAPYHD YSGNCVRCDG EKIVMAVA