Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_0485 |
Symbol | |
ID | 8224052 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 545769 |
End bp | 546932 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644928363 |
Product | glucose/sorbosone dehydrogenase-like protein |
Protein accession | YP_003084919 |
Protein GI | 255034298 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.335617 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAAGCG GTCTCGCCGC GCTGGCGCTG CTCATTACTC TTAATGCGTC GAAGCCGCAT CGGCCAGGGC CGGAAGCGGC GGCGGTGAGG GTGGTAGAGG CATTTCCCAA GCTGCATTTC GATTATCCCG TCGATCTGAC GCACTCCAAC GACGGTACTA ACCGGCTTTT TGTGCTGGAA CAGGAGGGGA CCATCCGCGT TTTCGCGAAT GCGGCATCCA CTTCCACGTC GAAGGAGTTT TTGAATATCA AAAAGCTCGT CAGCTACGGC GGAGAAGCGG GGCTGCTGGG GCTCGCGTTC CATCCCGATT ACAAAACCAA TGGCTACTTT TTCCTGAATT ATACCACCAA AGTGAATGGG AAACTGGAAA CGGCGATCGT CCGCTACAAA GTGAGTGCCA CCGACCCGGA CAAGGCCGAT CCCGCCAGCG CAGCGGTGCT TTTTACGTTC GATCAGCCGT TTGATAATCA CAATGGCGGC GCGGTGAAGT TTGGGAAAGA CGGCTACCTC TACATTTCAA CCGGCGACGG CGGCAGCTGG GGCGACCCGA GCAACAACGG CCAGAACAAA AGTGCCTGGC TAGGCAAAAT CCTCCGCGTA GACGTGAATA GCAAAACGAA AGGTAATTAT GGCATACCGG CTGATAATCC TTTTGCTGGA AACAAGGAAG GATTCAGGGA AGAAATTTAT GCGTATGGCT TGCGCAACCC GTGGCGGATC AGCTTCGACG ACGCTACGAA TACCCTCTGG ACAGGCGACG TAGGCCAAAA CAAGCGGGAG GAGATCAATA TCATCGTGAA AGGCGGCAAC TACGGCTGGC GCTTGAAGGA AAGCATCGAT TGCTACAACC CGAAACGCGA TTGCGGAGCA CAGGGGCTCA TCGACCCCGT GCTGGACCTT CCCCAGGCCA ACGGCGAGCA TTCGGTGACG GGCGGATTTG TGTACCGCGG TAAAGCGGTG CCGTCGCTCG AAGGTAAGTA TGTGTTCGGC GATTACGTGA GCGGCCGCAT TTTCGCGCTG GAAACGGCAA ATGGGAAGGC GGTAAAAAAC GATATCATCG CCGAAGGAGC AGGGCAGATT TCCGCATTCG GAACCGATCA GTCGGATGAG CTGTATATCT GCAACCACGG CTCAGGGAAA ATACTGAAAT TGTCCGGCCG GTAA
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Protein sequence | MISGLAALAL LITLNASKPH RPGPEAAAVR VVEAFPKLHF DYPVDLTHSN DGTNRLFVLE QEGTIRVFAN AASTSTSKEF LNIKKLVSYG GEAGLLGLAF HPDYKTNGYF FLNYTTKVNG KLETAIVRYK VSATDPDKAD PASAAVLFTF DQPFDNHNGG AVKFGKDGYL YISTGDGGSW GDPSNNGQNK SAWLGKILRV DVNSKTKGNY GIPADNPFAG NKEGFREEIY AYGLRNPWRI SFDDATNTLW TGDVGQNKRE EINIIVKGGN YGWRLKESID CYNPKRDCGA QGLIDPVLDL PQANGEHSVT GGFVYRGKAV PSLEGKYVFG DYVSGRIFAL ETANGKAVKN DIIAEGAGQI SAFGTDQSDE LYICNHGSGK ILKLSGR
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