Gene Dfer_0380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0380 
Symbol 
ID8223946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp433513 
End bp434589 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content54% 
IMG OID644928257 
Producthypothetical protein 
Protein accessionYP_003084814 
Protein GI255034193 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.000124111 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0430225 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACTT TGATTTTAAG TGCGCTTGCC ATTGCCTCCG TTTCAAACGC GATTGCCCAG 
GATTCAACGC AAACTGGCGC CGCGGCCGCG ACCTCGCCAT TCGCGGTGAG CGCGTATGTG
GAGTCGTATT ACTTGCAGGA TTTCGCTAAA AATGACAGCC ATACCATGCC CGGCTTTATT
TACAACCACA ATAGGACCGG CGAGGTGAAT ATAAACCTGG CGTTTCTCAA AGGCAGTTTT
ACCGGCGACC GAGTGCGTGC CAACCTGGCG CTGGCAGCGG GTACCTACAT GAATGCGAAC
TACGCCGCCG AGCCCGGCGT GCTGAAAAAC GTATTCGAGG CAAACGCGGG GGTGAAGATT
TCGAAAAACC ACAACCTCTG GCTCGATGCG GGCATTATGC CGTCGCATAT CGGTTTCGAG
AGTGCCATCG GGAAGGACAA CTGGGCACTG ACGCGCAGCC TGGTGGCTGA AAATACACCC
TATTTTGAGA CGGGTTTGAA GTTGGGATTC ACCAGTCAGG ATTCGAAATG GTACCTGGCA
GCGGTGTACC TCAACGGCTG GCAGCGCATC CAGCGGGTAG ACGGTAACAC TATGCCCGCT
TTCGGGACCC AGGTTACTTA TAAGCCCAAT GCGGCCGTGA CGCTGAATTA CAGCACATTC
ATCGGCAGCG ACAAGCCTGA TAGTACCCGG CAAATGCGGT ATTATCACAA TATTTACGGA
GTATTCCAGC TTTCGGAGAA ATGGGGCCTG ACAACCGGCT TCGACATCGG CAGCGAGCAG
AAATCGAAGC GCAGCAGCAC TTACAACACC GTGTACGTGC CAGTGATGAT CCTGCGCTTT
TCGCCTTCTT CGAGAATCCA TATCGCGGCG AGGGGCGAAT ATTATCACGA TCGCAAGGGC
GTCATTATCA GCACTGACCA TGAAGAAGGT TTCCGCACGC TCGGCACGTC GCTGAACATC
GATTACCAGA TCACCCCTCA GGTCATGTGG CGCATTGAGG TGCGCCACCT CGACCGCCAG
GATGTGTCCA AAAGCAGCAC CTACATGACC ACCGCACTCA CCTTTGCATT GAATTAA
 
Protein sequence
MKTLILSALA IASVSNAIAQ DSTQTGAAAA TSPFAVSAYV ESYYLQDFAK NDSHTMPGFI 
YNHNRTGEVN INLAFLKGSF TGDRVRANLA LAAGTYMNAN YAAEPGVLKN VFEANAGVKI
SKNHNLWLDA GIMPSHIGFE SAIGKDNWAL TRSLVAENTP YFETGLKLGF TSQDSKWYLA
AVYLNGWQRI QRVDGNTMPA FGTQVTYKPN AAVTLNYSTF IGSDKPDSTR QMRYYHNIYG
VFQLSEKWGL TTGFDIGSEQ KSKRSSTYNT VYVPVMILRF SPSSRIHIAA RGEYYHDRKG
VIISTDHEEG FRTLGTSLNI DYQITPQVMW RIEVRHLDRQ DVSKSSTYMT TALTFALN