| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0297 |
|---|
| Symbol | |
|---|
| ID | 8223863 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 335563 |
|---|
| End bp | 336942 |
|---|
| Gene Length | 1380 bp |
|---|
| Protein Length | 459 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 644928175 |
|---|
| Product | oxidoreductase domain protein |
|---|
| Protein accession | YP_003084732 |
|---|
| Protein GI | 255034111 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.628697 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.651102 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCTG ATCGCCGCAA TTTTATTAAA AATGTAACAG CCGCGTCTGC ACTGTTAGCC
ACGGAAAGTT TTGCCAAACC TTTTCACATT ATCAAAGACC TCAAAAAAAT CAGTCCTAAC
GACAAGATCC GCTTCGCGAC AATCGGCATG GGTATCCAGG GGCACAGCGA CACCAAGGCC
GCATTGCGCA GCTCGCAGGA CGTGGAGTTC GTAGCCGCCG CCGACCTGTA CGACGGCCGC
CTTACCCGTG TGAAGGAGCT TTACGGAAAA GACATTTTCA CCACCCGCGA CTACCGCCAG
ATCCTCGAAC GGAAGGATAT CGACGCGGTG CTCGTGGTAA CCCCCGACCA TTGGCACGAC
CACATCACTA AAGCCTCATT GCAGGCCGGC AAACATGTAT ACTGCGAAAA GCCGATGGTG
CACCATATCA ACGAAGGAAT TTCGGTGATC GACGCCTGGA AAAAGTCGGG CAAAACGATG
CAGGTCGGCA GCCAGCGGAT CAGCTCGGCG TCTTTCAAGG AGGCCAAGCG GCTGTTCCAG
GCTGGGGAAA TCGGTGAAAT CAATTATGTG GAATCGAACA ATGACCGTTT CAATGCCATC
GGCGCATGGA ACTACTCCAT TCCCACCGAT GCCTCGCCCA GCACCGTCGA CTGGGATGCC
TACCTGGGCG ACGCCCCCAA GCGCCCGTTT GATGCGAAAC GTTTTTTTCG GTGGAGAAAT
TACCAGGATT ACGGTACCGG GGTCGGCGGC GATCTTTTTG TGCACCTCAT CACAGGCGTG
CATTTCGTCA CCAACTCGCT CGGGCCGGAA CGTGTAATGT CTTCCGGCGA GCTGAGCTAT
TGGAATGATG GCCGCGATGT GCCCGACGTG CTGGTATCCA TCCTCGACTA CCCGAAAACG
GACATTCACG CCAACTTCCA GATGGTACTC CGCGTGAACT TCGCCAATGC AGGTGCCATT
GCAAATAACA CCCGCATTAT CGGCACCGAG GGACAGATCG AATTTACTGA GAACAACCTG
GTGCTTACCA AGAAAAAACT GCCGAAAGCG CCCGGAATGG GCGGTTACGA TAGCTTTAAC
ACATTCTCGG AAGCGCAGCA GAAGGAGTTC AAAAAGCAAT ACGACGCGCA ATACCCGGAA
GACACCCGAA AAGCGGAGCC TGTCAAAGAA GTGCGGTTTG TAGCGCCGAA AGAGGACGAT
GCACACGCCA ACCATTTCAA AGACTTCTTT GAAAATGTGA AAAAAGGAAG CCTGGGGACG
ATTGAAGACC CTGTGTTCGG TTTCAGGGCC GCGGCGCCGG TACTCGCTTG CAACGAAAGC
TATTTCAGTA AAAAAATCAT CCATTGGGAC CCGGTGGCGA TGAAAACGAA GAAAAAATAA
|
|---|
| Protein sequence | MKPDRRNFIK NVTAASALLA TESFAKPFHI IKDLKKISPN DKIRFATIGM GIQGHSDTKA
ALRSSQDVEF VAAADLYDGR LTRVKELYGK DIFTTRDYRQ ILERKDIDAV LVVTPDHWHD
HITKASLQAG KHVYCEKPMV HHINEGISVI DAWKKSGKTM QVGSQRISSA SFKEAKRLFQ
AGEIGEINYV ESNNDRFNAI GAWNYSIPTD ASPSTVDWDA YLGDAPKRPF DAKRFFRWRN
YQDYGTGVGG DLFVHLITGV HFVTNSLGPE RVMSSGELSY WNDGRDVPDV LVSILDYPKT
DIHANFQMVL RVNFANAGAI ANNTRIIGTE GQIEFTENNL VLTKKKLPKA PGMGGYDSFN
TFSEAQQKEF KKQYDAQYPE DTRKAEPVKE VRFVAPKEDD AHANHFKDFF ENVKKGSLGT
IEDPVFGFRA AAPVLACNES YFSKKIIHWD PVAMKTKKK
|
|---|
| |