| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0289 |
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| Symbol | |
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| ID | 8223855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 327578 |
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| End bp | 328714 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644928167 |
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| Product | glycoside hydrolase family 5 |
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| Protein accession | YP_003084724 |
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| Protein GI | 255034103 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2730] Endoglucanase |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.014441 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCATCGCA GGACATTCAT ACAAAATACA TCCATCGCAC TGGCCGGGGC CGCATTGGCT
CCCGGCCTTG CCGTTTCGGG CCAGGCAGCG CAGAACAAGC TGCCCAAATG GAAAGGCTTC
AATCTACTCG ATTTCTTTTC GCCAGACCCC GCCAAAGGCC GTAAGCCCAC CACCGAGGAA
CAGCTCAAAT GGATGAGCGA CTGGGGCTTC GATTTCATTC GCATTCCGAT GGCCTACCCG
GCTTACCTTA AATTCGATCG CAGCAAAAAC ATCACGCCGG AAGAAGTGTA CCAGATCGAC
GAGCGGGCCG TGGAACGGAT CGATAAGCTC GTGGCCGCGG CGCACAAATA CAACATGCAC
GTGAGCCTGA ACCTCCACCG GGCGCCGGGT TACTGCATTA ATGCGGGTTT TAACGAACCC
TACAACCTCT GGACCGACCA GAAAGCCCTC GATGCATTCT GCTTCCACTG GAATATGTGG
GCTAAACAAT ATAAAAATGT GAGCTCTGCA CGGATCAGCT TCGACCTGCT GAACGAGCCG
AGCATGCGCG CGGATATGAA CGACCAGCAT TCGAAACGCT CATCGGTGCC TGGTGACGTT
TACCGCAAAC TCGCGATTGC CGCGTCGGAA GCGATCCGGA AGGAAAACCC GGGACACCTG
ATCATCGCCG ACGGCAACGA CGTAGGTACA TCGGTCATCC CCGAGCTGGC CGACCTCGAC
ATTGCACAAA GCTGCCGCGG CTACCACCCG GGCATTATTT CGCATTACAA AGCGCCCTGG
GCCACGAAAG ATCCCGACAA TGTGCCGGAA CCAAAATGGC CCGGGCAGGT AGGCGACCAA
TACCTCAGCC GGGCCATGCT GGAAAAGTTT TACAAGCCGT GGATTGAGCT CGTCAAAAAG
GGCGTGGGCG TGCATTGCGG CGAATGCGGC TGCTGGAATA AAACGCCGCA CGCGGTTTTT
CTGGCCTGGT TTAACGACGT GCTCGACATC CTGTCATCGA ACGGCATCGG CTTTTCGCTA
TGGGAATTCG CCGGCGACTT CGGCGTGCTC GACTCCCGCC GCGATGATGT TGCGTACGAA
GACTGGTACG GCCACAAGCT GGACCGCAAG TTGCTCACGC TCCTGATGAA ATACTGA
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| Protein sequence | MHRRTFIQNT SIALAGAALA PGLAVSGQAA QNKLPKWKGF NLLDFFSPDP AKGRKPTTEE
QLKWMSDWGF DFIRIPMAYP AYLKFDRSKN ITPEEVYQID ERAVERIDKL VAAAHKYNMH
VSLNLHRAPG YCINAGFNEP YNLWTDQKAL DAFCFHWNMW AKQYKNVSSA RISFDLLNEP
SMRADMNDQH SKRSSVPGDV YRKLAIAASE AIRKENPGHL IIADGNDVGT SVIPELADLD
IAQSCRGYHP GIISHYKAPW ATKDPDNVPE PKWPGQVGDQ YLSRAMLEKF YKPWIELVKK
GVGVHCGECG CWNKTPHAVF LAWFNDVLDI LSSNGIGFSL WEFAGDFGVL DSRRDDVAYE
DWYGHKLDRK LLTLLMKY
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