Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_0188 |
Symbol | |
ID | 8223754 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 214505 |
End bp | 215518 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644928067 |
Product | Mammalian cell entry related domain protein |
Protein accession | YP_003084624 |
Protein GI | 255034003 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.107684 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.968767 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACAT CAACCAAACG CTCGGTCAAC GTAGGCCTTT TCGTCATCAT CGGCATTCTC ATTTTCGTAG TGGGGATTCT CACCATCGGA AGCATGAAGA AGGTTTTTTC ATCGACTATT ACCGTCAAAA CCATTTTCGA TGATGTAAAC GGACTGAAAA TCGGTAACAA TATCTGGTAT TCCGGGGTGA AGATCGGAAC TGTCAAGAGC ATCCGTTTCC TCGACAATTC CAAGGTAGAG GTAATGCTCA ACATCGAAGA AAAGTCGCAG GAATTCATCC GCAAAAATGC CAAGGCCAAG GTCAGCACCG ACGGTCTGAT CGGCAACAAG ATCATCGTCA TTTACGGCGG CACGCAAAAA GTGCCTTCCA TTGAGGACGG CGATGAGCTG CTCGTGGAGA AAATTGAAAG TACGGAAGAA ATGCTCGCCG TGCTTTCGGA AAACAACAAA AACCTGCTCG GCATCACCAG CGCATTCAAG ACCATCAGTA AAAACATCCT CGCCGGAAAA GGTACGGTAG GTATGCTGCT TAACGACGAG CGTCTTTACA ACGACCTCGA CCAGACCCTG GGCGCGATGA AAAAAGCGTC CGTGAATGCG CAGTCACTCA CTGCCTCGCT GGCCGGCTTC TCGGCGAAAC TGAATGAAAA AGGCGGGCTG GCGAATGATT TCGCTACGGA CACCGTGATC ATGAAAGACC TTCGGAGCAG CATTGCGCGC CTGAACGAAA CGGTGTCGTC GGCGAATGTG ATGGTCAATA ACCTGAAAAC AGCCAGCGCG GATCTCAATT CGAATAAAAC CAGTCCGCTG GGCGTCCTGC TGCACGACGA AGCCACGGCT TCCAACCTGA AAGAAACGCT GAAAAACCTG GAAAGCACTA CCGAGAAGCT GGACGAAAAC ATGACCGCGC TTCGTTCCAA CTTCCTGTTT CGCAGGTATT TCCGTAAGAA AGAGAAGGAA CAGGCCAAGC AGCCGGCCAA AGAAGAAGTA AAAGAGCAGG AGAACCAACA ATAA
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Protein sequence | MATSTKRSVN VGLFVIIGIL IFVVGILTIG SMKKVFSSTI TVKTIFDDVN GLKIGNNIWY SGVKIGTVKS IRFLDNSKVE VMLNIEEKSQ EFIRKNAKAK VSTDGLIGNK IIVIYGGTQK VPSIEDGDEL LVEKIESTEE MLAVLSENNK NLLGITSAFK TISKNILAGK GTVGMLLNDE RLYNDLDQTL GAMKKASVNA QSLTASLAGF SAKLNEKGGL ANDFATDTVI MKDLRSSIAR LNETVSSANV MVNNLKTASA DLNSNKTSPL GVLLHDEATA SNLKETLKNL ESTTEKLDEN MTALRSNFLF RRYFRKKEKE QAKQPAKEEV KEQENQQ
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