Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_0117 |
Symbol | |
ID | 8223683 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 132670 |
End bp | 133296 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644927996 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003084553 |
Protein GI | 255033932 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.712391 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACGCAA CACAAGAGAA AATTAGTAAA CGGGCATTGG AGCTCTTCAA TCTCAAAGGG ATCGAGTACG TAGGCATGCG CGAGCTCGCC GCAGACCTGG GCATGCGCAT TGGCAACCTT ACCTACTACT TCCCAACCAA AGACGACCTC GTTTTCAGCA TCAGCAAGGC TTACACGGAA TCCAATTCAA AGATTCACAG CGATTCACCT GTAAAAAGCT TGTACGACTT TCTGTACAAA AACAAACTGC TTTTCGAGAA CGGCCTAAAA TACCAATGCC TGCTGCTGAG CATGGTACAT TTAATGGAGC AAAATTCGCT CATCGCTGCG AACTACCAGG GCAATGTGAT GCAAAACCGG ATGTCGGGCC TAGTTCGCGA CATCGAGCTC CTGGAAGAAA ACAAATACCT GAAATTCAGC TGCGAAGACG ATAAGCTTTT GATTATTTCC AGCAACAGCC TGCAAAGTCG CTTCTGGCTT TCGGAAGCGG TATTAACCGA GTCTCGGTCA AATTTGGCAC GGCAGCTAAC CCATTATCTG AGAATGAAGG CGCATTTGTT CCGGCCGTAT GCAAGTAAAA AGGGGATTGA AGATATTAAT AGGTTTGTCG TAGAGTTGAC GGCTTGA
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Protein sequence | MNATQEKISK RALELFNLKG IEYVGMRELA ADLGMRIGNL TYYFPTKDDL VFSISKAYTE SNSKIHSDSP VKSLYDFLYK NKLLFENGLK YQCLLLSMVH LMEQNSLIAA NYQGNVMQNR MSGLVRDIEL LEENKYLKFS CEDDKLLIIS SNSLQSRFWL SEAVLTESRS NLARQLTHYL RMKAHLFRPY ASKKGIEDIN RFVVELTA
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