Gene Dfer_0101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0101 
Symbol 
ID8223667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp116552 
End bp117598 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content59% 
IMG OID644927980 
ProductCytochrome-c peroxidase 
Protein accessionYP_003084537 
Protein GI255033916 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1858] Cytochrome c peroxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGTTGG TCAAACTGGG CTGGTTTTGC ATTGTCTTGC TAATCTCCTC GTGTGACAAG 
GATACGGTGG CACCTGCGGA AAACGCGTAT GCGTTCGAGG TGCCGCCGCA TTTCCCTGTT
CCTGTTCCGG ATGCGCATAA TCCTATGACT GAGGCCGGCA TCCGGCTGGG CAGGCAGCTA
TTCTATGACC GGCGCTTGTC GGCCAACAAC AAGGTTTCCT GCGCAAGCTG TCACGATCCC
GCCAAGGCAT TCAGCGACGG GGTCGCGCTT AGCACATCAG GCGTGTCGGA CACGCAGTTG
CTGCGGCATG CACCGGCGCT GTTCAATCTG GCCTGGGCGA CCAACGGCCT TTTCTGGGAC
GGCGGCTCGA CTAACCTGGA ATCGCAGGCG TTCGGGCCGC TCACCGCCCA TGACGAAATG
GCCCAGGATT TGTACGAACT GGTGGATGAA CTCAATGCGG ATGCGTCGTA CGTGAAGGGT
TTCCAGGAGG CTTTTTCGGC AGGCATAACC TCGCAGAATG TGGCCAAAGC GCTCGCGCAG
TTCCAGCGCT CACTCGTTTC GGCGACTTCG CGGTACGACG ATTTCCGGCT AGGACGCAAC
GGCGCAGTGC TCACTCCGGA AGAAATGTCG GGCTTGGCGC TGGTCCGGCA GCATTGCCAG
GGATGCCATT CCGGCGAGCT TTTCACGGAC AACGGCTACC ACAACAACGG GCTCGACAGC
CGTTTCGACA ACCAGGATCA CGAGGGAATC TTCATGGGCC GCTACCGGAT CAGCTACGAC
GAGGGTGATT TGGGCAAATT CAAAACGCCG TCGCTTCGCA ATGTAACGCT CACAGCACCC
TACATGCACG ACGGCCGCAT ACCCACGCTC GAAAAGGTGC TCGACCATTA TTCAAACGGC
ATCCAGCATT CGGCCACGCT CGATGGCCGC ATCCCGCAGC AGGGCTTCGC ATTCAGTGCT
GTCCAGAAGA CCCAGATCAT CGCCTTTCTG GCAACATTGA CAGACGAGCG GTTCGTAAGC
AACCCCGCGC ATCAGAAACC ACATTAG
 
Protein sequence
MRLVKLGWFC IVLLISSCDK DTVAPAENAY AFEVPPHFPV PVPDAHNPMT EAGIRLGRQL 
FYDRRLSANN KVSCASCHDP AKAFSDGVAL STSGVSDTQL LRHAPALFNL AWATNGLFWD
GGSTNLESQA FGPLTAHDEM AQDLYELVDE LNADASYVKG FQEAFSAGIT SQNVAKALAQ
FQRSLVSATS RYDDFRLGRN GAVLTPEEMS GLALVRQHCQ GCHSGELFTD NGYHNNGLDS
RFDNQDHEGI FMGRYRISYD EGDLGKFKTP SLRNVTLTAP YMHDGRIPTL EKVLDHYSNG
IQHSATLDGR IPQQGFAFSA VQKTQIIAFL ATLTDERFVS NPAHQKPH