Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_0095 |
Symbol | |
ID | 8223661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 110411 |
End bp | 112153 |
Gene Length | 1743 bp |
Protein Length | 580 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644927974 |
Product | beta-lactamase |
Protein accession | YP_003084531 |
Protein GI | 255033910 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAAACC GCCGCCTTTT TCTGATTCTA TCTCTTCTAT TATTTGCATT CAACGCCCAG GCCGACGAAC TCGACGATTT TATCCGCAGC CAAATGCAGA AGCGGCGCAT TCCCGGTTTG TCACTGGCTA TCATCCAGGA TGGAAAAATC CTGAAAGCGC AGGCATACGG ACTTATTGAT AAAGATGGAA AAGTGCCTGT CACGACGAAC ACATTGTTCC AGGCGGGTTC GGTGAGTAAA TCCGTGGCGG CTATGGGCGC GCTGTATCTG GTGGAACAGA ATAAACTTGC TCTGGATGAG GATGTTAATG TTAAATTGAA AAGTTGGAAA GTGCCTGATA ATGAATTCAC AAAGGATAAA AAGGTCACAC TGCGCGGGCT GCTCAGCCAT ACTGCCGGAC TTACCGTGCA CGGGTTTCCG GGATATGCCG TGGGCGAAAA AATGCCTTCG GTGATTCAAA TTCTGGATGG GACGGCCCCG GCCAATACAC GACCAGTTCG TGTGGATTTT GTGCCGGGCT CGCGTTGGAG GTACTCGGGC GGCGGTTATA CAGTCATGCA GCAACTAGTG GAGGATGTGA CGGGCGCTGC TTTCCCGGAA TTCATGAAAA TTCATGTGCT TTCGCCATTG GGCATGAACA ATAGCACCTA CCAGCAACCG TTACCGCCCG AACCCGCCAA GTCGACGGCA ACCGGTCACT ATAACAACCG AAGTGTGGTG GAAGGCCGCT GGCACATTTA TCCGGAGATG GCGGCCGCGG GATTGTGGAC GACGCCGTCC GATCTGGCCC GGTTCGCGAT CAGTATTCAG AACGCTAACG CCGGAAAATC AGGGAGTATA TTATCTCAGT CGATGACCCG CCAGATGCTG ACGGATCAGA AAAACAGGGA TGGATTGGGC GTTTTTTTGC AGGGGGATAG TACCACGCTC CGCTTCGGTC ACAACGGGCG CGACGAAGGT TTCGATGCGC TGCTCACCGC CAGTGCGCAC AAAGGAAATG GCATTGTGAT CATGATCAAT GCGAATGATA ACTCGCATAT GATGGGCAGG ATCGTAGACT TTATCGCCGA CTACTACCAT TGGGATGGAT TTGCAGCCAA GCGGGCGAAA CCGGCCGCGG TGGATGTGGA TGCCAAGGCT TTAAAGGCTT TCGAAGGCCG GTATGAGTTG TTCAACAATC GAATGGTCAC TTTTGAGGCC GGGGGGCAGC GGCTCTTTAC CCTGGAAGAT GGCTTTGTGG ACGAAGAATT CGTGGCGGTT GGTTCCAATA AGTTTACATC TACCGACCGC AATGTTTCCG TGATCTTCAA TGCGGACGAT CGTGGAAATG CGACTGGCTT CACGCTGCAA GACAATGATC AGCGCTATGA GCGAAAAGTG CCGCGTATCG GGCCGCTGGC CGATGCGGGT AAATCCAATG CCGATCCGGA CCCGTCGCGC ACGCCCAAAA TCCTGGCAGC TTTGCAGGCT TTGGTAAAAG GCGGTAAAAC ATTGGAAGAA GCATCGGGCC TCACGCCGGG CGCCAAACGC GATTTCGCAG GAGGCATGCG CGAGCCGGAA ACGCTGAAAT CATTGACTTT CGTCCATTCA GAAAACGTGG CAGGCCGGGG CATTAAGCGC CATGAAAGCC ACGTGAGCGA GATTGTGACT TACCAATTAA AGTCCAGTCA GCCGGACACC TTTATACTCG TCCATCTCAC TTCCGACGGG CTGGTTACGG ATTGCGATCT CGTGGAAAAA TAA
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Protein sequence | MRNRRLFLIL SLLLFAFNAQ ADELDDFIRS QMQKRRIPGL SLAIIQDGKI LKAQAYGLID KDGKVPVTTN TLFQAGSVSK SVAAMGALYL VEQNKLALDE DVNVKLKSWK VPDNEFTKDK KVTLRGLLSH TAGLTVHGFP GYAVGEKMPS VIQILDGTAP ANTRPVRVDF VPGSRWRYSG GGYTVMQQLV EDVTGAAFPE FMKIHVLSPL GMNNSTYQQP LPPEPAKSTA TGHYNNRSVV EGRWHIYPEM AAAGLWTTPS DLARFAISIQ NANAGKSGSI LSQSMTRQML TDQKNRDGLG VFLQGDSTTL RFGHNGRDEG FDALLTASAH KGNGIVIMIN ANDNSHMMGR IVDFIADYYH WDGFAAKRAK PAAVDVDAKA LKAFEGRYEL FNNRMVTFEA GGQRLFTLED GFVDEEFVAV GSNKFTSTDR NVSVIFNADD RGNATGFTLQ DNDQRYERKV PRIGPLADAG KSNADPDPSR TPKILAALQA LVKGGKTLEE ASGLTPGAKR DFAGGMREPE TLKSLTFVHS ENVAGRGIKR HESHVSEIVT YQLKSSQPDT FILVHLTSDG LVTDCDLVEK
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