| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0094 |
|---|
| Symbol | |
|---|
| ID | 8223660 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 109606 |
|---|
| End bp | 110247 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 644927973 |
|---|
| Product | major paralogous domain protein |
|---|
| Protein accession | YP_003084530 |
|---|
| Protein GI | 255033909 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02145] Fibrobacter succinogenes major paralogous domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.718944 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCATGA TGAAACAACA CGTCTTCGCA GCATTTGCTG TGTTATTCTT GAAACAGATG
GGATTCGCGC AATCCACCGG CACCTTCACC GACGCGCGTG ATGGCCAAAC GTATAAAACG
ATCAGCTTTC AAGAATCCAC GACGGGCAAA ACCGTAACCT GGATGGCACA AAACCTGAAC
TACAAAGTTG ACGGCAGCTA TGCTTATGAA TATAAGGAAA ATAATCGAAA CGAGCTGGGC
TTGCTCTACA CCTGGGAGGC GGCCAAAAAA GCCTGTCCCA GCGGTTGGCA TGTGCCCACT
GATAACGAAT GGGCGACGCT TGTGCATCAA TTTGGTGGAA TGGACATGGC CGGCGAAGCG
CTGAAAAGCG TCAAAAGCTG GAATGAAGAC GGCAACGGCA ATAACAGCAG TGGGTTCGAT
GCGCTTGCAG GAGGCCACCG AAGACCTGAT GGCACTTATG TAGCTCAAGG TTTCCTCGGT
ATTTTTTGGA CGTCGTCAAT AAGCACTTCT GTCGACAAAG CCTGGGCATG GAACTTTCAC
TACGGCGGCC CTCCCAGCAG CAATAAACAA AATCTAAAAA AAGCCTTCCG CTGGGACAAC
GATGTCGCCG GCGGCTATTC GGTTCGGCTG GTCAGGGATT AG
|
|---|
| Protein sequence | MIMMKQHVFA AFAVLFLKQM GFAQSTGTFT DARDGQTYKT ISFQESTTGK TVTWMAQNLN
YKVDGSYAYE YKENNRNELG LLYTWEAAKK ACPSGWHVPT DNEWATLVHQ FGGMDMAGEA
LKSVKSWNED GNGNNSSGFD ALAGGHRRPD GTYVAQGFLG IFWTSSISTS VDKAWAWNFH
YGGPPSSNKQ NLKKAFRWDN DVAGGYSVRL VRD
|
|---|
| |