| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0043 |
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| Symbol | |
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| ID | 8223609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 48900 |
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| End bp | 50597 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644927923 |
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| Product | Na+/solute symporter |
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| Protein accession | YP_003084480 |
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| Protein GI | 255033859 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.290751 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACGC TCGACTGGAT TGTTCTTTCT CTTGCCCTGC TGTTTGTTGT TTTTTATGGG
ATCTACCGGA GTCGTGAAAA GCACACGATG GACTCCTTTT TGCTTGCTGG GCAGTCTATG
CCCTGGTACC ATGTGACATT GTCGCTCATG GCTACCCAAG CGAGCGCAAT CACCTTCCTT
TCGGCGCCCG GGCAGGCCTA CACCGATGGA ATGCGGTTTG TGCAGTTCTA TTTCGGCCTG
CCGCTTGCGA TGGTGGTACT TTGCGTGACT TTCGTTCCCA AATTCGGGAA GTTGAAAATC
TTTACGGCCT ACGAATTCCT GGAAGGTCGC TTCGATCTGC GCACGCGCGC TCTCACGGCA
TTTTTGTTCC TCCTGCAACG CGGTTTATCC ACCGGGCTTT CCATTTATGC CCCGTCTCTG
ATACTATCGG CCATTTTGGG CTGGGATATT ACATGGACCA ACATTATTTC CGGAGGCGTA
GTGATCCTCT ACACTACTCT CGGCGGCTCG CGGGCCGTTT CGCACACACA TTTGCAGCAA
ATGGGCATTA TCACCATCGG CATGGTGGTG GCGGGTGTGA TGGTGGTCAA GTTCCTGCCC
GGGCAGGTTT CGTTCACCGA TGCGCTGCAT GTGGCCGGCA AAATGGGTAA AGTGAACCTG
ATCGACTTCA CATTCGACCT CAACAACAGA TATAATGTAT GGTCCGGGCT GATCGGCGGG
TTCTTTCTCC AACTCTCCTA TTTCGGCACC GATCAGTCGC AGGTAGGGCG GTTTCTTACC
GGCAGTTCGC AGGGACAAAG CAAATTGGGA CTGGCCATGA ACGGCTTGCT CAAAATACCC
ATGCAATTCC TCATCCTGCT CGTGGGGGTG CTGGTGTTCG CATTCTACCA GTTTACGGCG
CCGCCGCTGT TTTTCAATCA AACGGCTGTG GATCAGGTCA AATCCACTCC CTATGCTGCT
GAATATGCGG CTTTGGAAAA ACAACATGCC GAGATCCAGG CCGTGAAGCG CCCGCATGTG
ATGGCCTTGA CCGAAGCCAT CCGCCAGGAC GATGCCCAGG CGATTGCATC ATCCAGAACC
GTACTTGCCG ACCTGGAAAG TAAAGTAAAA GACGTTCGGA AGGAAGCTAC CGCCGTGCTT
TCCAAAGCGA ATGGCGGCGA TACCAACGAC GTGAACTACA TTTTCCTCCG ATTCGTGATC
GACTACCTGC CCGTGGGCAT GGTGGGACTG CTCATTGCGG TGATCCTGCT CGCTTCAATG
GGCTCCGTCG CAGCAGCTTA CAACTCGCTC GCATCCTGCA CGATCGTCGA TATTTATAAA
AGGATAATCC GCAAAGACGA AAACGGCCGG AACTACGTGG CCGCCTCGCG CTGGGCGACG
GTTTTCTGGG GTATCTTCTG CATTGCGGTG GCGCAATATG CCTCGCGCCT GGGTAGTATG
ATCGAAGCCG TGAACATACT TGGATCGCTA TTCTACGGTA CAATTCTCGG AATATTCCTG
GTAGCATTCT ATTTCAAAAA CATCGGCAGC CGGGCGGTAT TCTGGGGAAG CATTATCGGA
GAAATGTTCG TGATCGCAAG CTACGTGATC GACCTCACGG CATTCCTCTG GCTAAACCTG
ATCGGCTGTG CGCTCGTGAT CATCTTCGCC TGGGTGATAG AAAAAATCTG GCCGGAGCAA
ACGCAGGTTG CCGGGTAA
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| Protein sequence | MSTLDWIVLS LALLFVVFYG IYRSREKHTM DSFLLAGQSM PWYHVTLSLM ATQASAITFL
SAPGQAYTDG MRFVQFYFGL PLAMVVLCVT FVPKFGKLKI FTAYEFLEGR FDLRTRALTA
FLFLLQRGLS TGLSIYAPSL ILSAILGWDI TWTNIISGGV VILYTTLGGS RAVSHTHLQQ
MGIITIGMVV AGVMVVKFLP GQVSFTDALH VAGKMGKVNL IDFTFDLNNR YNVWSGLIGG
FFLQLSYFGT DQSQVGRFLT GSSQGQSKLG LAMNGLLKIP MQFLILLVGV LVFAFYQFTA
PPLFFNQTAV DQVKSTPYAA EYAALEKQHA EIQAVKRPHV MALTEAIRQD DAQAIASSRT
VLADLESKVK DVRKEATAVL SKANGGDTND VNYIFLRFVI DYLPVGMVGL LIAVILLASM
GSVAAAYNSL ASCTIVDIYK RIIRKDENGR NYVAASRWAT VFWGIFCIAV AQYASRLGSM
IEAVNILGSL FYGTILGIFL VAFYFKNIGS RAVFWGSIIG EMFVIASYVI DLTAFLWLNL
IGCALVIIFA WVIEKIWPEQ TQVAG
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