Gene DehaBAV1_0880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDehaBAV1_0880 
Symbol 
ID5132420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides sp. BAV1 
KingdomBacteria 
Replicon accessionNC_009455 
Strand+ 
Start bp869694 
End bp870338 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content43% 
IMG OID640529798 
Producthypothetical protein 
Protein accessionYP_001214340 
Protein GI147669522 
COG category[S] Function unknown 
COG ID[COG2928] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.677623 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACCAT CAAATAACCC ACCATTAAAA ATACTGCGAA ACCGCTTTTT AACAGGGCTT 
GCCTTTGTCT TACCTATCGG AGCGGCTTTA GGACTGCTGA TTTGGGTATT TAATATTGTA 
GACGGTATGC TAAAACCAAT TATAGAGTTG TTCTTTAACT GGTATTTTCC GGGCGTGGGT 
CTTTTAGTAA CACTGCTCCT GATATACTTG GTAGGACTGG TATTAAGCAA CTATTTCGGT 
AAACAAATAT TGAGCTGGAT TGACAAACTA CTGGCCAAAG TACCCATTTT CAACCAGATA 
TATAACAGCG CCAAACAGGT TATACAGACA CTAGGTGTGG GCAATAAAGT CTCTTTTAAA 
GAGGCCGTGG TGGTAGAATT TCCCCGCGTG GGCATGCACA GTCTGGCATT TATCACAAAT 
GAAACCACCA ATTCCAGCGG TGAAAAACTG TATCTGGTGT ATGTGCCGGG CTCTCCCAAC 
CCAACCAGCG GTTTTTTAGA GCTGCTCCGG GAAAATCAGA TTGAGCGGGT AAATATTTCG 
GTTGAAGATG CCATGAAAAC TCTTATCTCC TGCGGCTTGG TATTTCCGGA AACTGTCCAA 
AGCATTGAGA TTGGACATGG GGATTCACAC CCCAACAAAC TCTAA
 
Protein sequence
MSPSNNPPLK ILRNRFLTGL AFVLPIGAAL GLLIWVFNIV DGMLKPIIEL FFNWYFPGVG 
LLVTLLLIYL VGLVLSNYFG KQILSWIDKL LAKVPIFNQI YNSAKQVIQT LGVGNKVSFK 
EAVVVEFPRV GMHSLAFITN ETTNSSGEKL YLVYVPGSPN PTSGFLELLR ENQIERVNIS 
VEDAMKTLIS CGLVFPETVQ SIEIGHGDSH PNKL