Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0653 |
Symbol | |
ID | 5131076 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | - |
Start bp | 643074 |
End bp | 644195 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640529556 |
Product | DNA protecting protein DprA |
Protein accession | YP_001214116 |
Protein GI | 147669298 |
COG category | [L] Replication, recombination and repair [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake |
TIGRFAM ID | [TIGR00732] DNA protecting protein DprA |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.412317 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAACC AAGATAACAA CTACGCCATA GGTTTCAGTT ATATAAACGG GGTCGGCCGG GTACGCCTGA ACCTGCTGGA TAACTATTTC GGCAATCTGG AAAATGCCTG GCATGCCGGC AAAGAAGCTC TGATATCAGC CGGACTTGAT AACACTCTGG CCGAAAATAT TGTGGCTCAC CGTCCTAAAA TAGACCTCTC TAAAACCCTT GAAACCCTGA AACGGCATGA TATACAGACA TATGCCCACA CGGATAAAGA TTATCCTGCC AGCTTAAGGC AAATACATGA TTATCCGCCC CTTATTTTTG TAAAAGGACA GCTTTTACCA GCAGACGAAC TGTGTTTGGG TATAGTAGGT ACCCGCCAGC CCACGGTATA CGGAAAACTG GTAACCGAAG AACTGGCGGA GTCTCTGGCA CGGGCCGGTC TGACCATAGT CTCAGGTCTG GCTAGAGGCA TAGATACTGT TGCCCATACC GCAGCCCTGA AGGCCGGCGG CAGAAGCATT GCGGTTTTTG GTTGCGGGCT GGATATTATT TACCCCTCAG AAAACCATTC ACTTGCCCGC CAGATAGCTG AAGACGGGGC GCTTATAAGC GAACATCCGC CCGGAATCCG TCCCCGCCCC GAATTTTTCC CCCGCCGCAA CCGTATACTC TCGGGTTTAT GCCGCGGCAT ACTGGTAACC GAAGCTGGAG AAAACAGCGG GGCAGTTATA ACCGCAAATT ACGCACTTGA ACAAAACCGC GAGATTTTTG CCGTTCCGGG GAGTATACTA TCACCGTCTT CATTGGGGAC TAACCGCCTT ATTCAGGAAG GGGCAAAGCT GGTTAGCTCT GCCAAAGACG TACTTGAAGA ACTGAATATC AGCCTGTTTT CAGAGGAGAA TACTACCGTT GAAATTATAC CTGAAAACCA GACTGAAAGC TTGATATTGG GTAAACTTGG CTATGAGCCT GTACATATTG ACCAGATTTG CCGTGAGTGC GCTCTGGGTG TAGCCTTGGT CAGTGGCACC CTGGCCATAA TGGAACTGAA AGGTCAGGTC CGTTCTACCG GAGGCATGAA TTATGTGCGA ACCCGGGAAA AGAAGGAAAT CTACCAGCTG GAGATGAATT AA
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Protein sequence | MQNQDNNYAI GFSYINGVGR VRLNLLDNYF GNLENAWHAG KEALISAGLD NTLAENIVAH RPKIDLSKTL ETLKRHDIQT YAHTDKDYPA SLRQIHDYPP LIFVKGQLLP ADELCLGIVG TRQPTVYGKL VTEELAESLA RAGLTIVSGL ARGIDTVAHT AALKAGGRSI AVFGCGLDII YPSENHSLAR QIAEDGALIS EHPPGIRPRP EFFPRRNRIL SGLCRGILVT EAGENSGAVI TANYALEQNR EIFAVPGSIL SPSSLGTNRL IQEGAKLVSS AKDVLEELNI SLFSEENTTV EIIPENQTES LILGKLGYEP VHIDQICREC ALGVALVSGT LAIMELKGQV RSTGGMNYVR TREKKEIYQL EMN
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