Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0398 |
Symbol | |
ID | 5131021 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | - |
Start bp | 401580 |
End bp | 402353 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640529299 |
Product | extracellular solute-binding protein |
Protein accession | YP_001213861 |
Protein GI | 147669043 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000444097 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCGCT TAAGTACTAT CCTTATGACA CTGCTCCTGT CCAGCGCATT GCTGTTCTCT GGCTGCCAAA GCTCTACTGA TGACACTGAC GACAGCACTG CCACACTACA GATTACCGTG GTAACCGATG CCACCTGGGC GCCCTTTGAG TATGTTAATG AACAAACTCA TGCTATAGAG GGTTTTGATA TAGACCTGAT GAAAGCTATT GCCGAAAAGG CCAACCTGGA AGTCACCTTC CAGAATGTGG CTTGGGATGC CTTACTGGCA GGTATGGCTA CCGGTCAGTA TAAAGTAGCC ATTTCCTCAA TCACCATTCT CCCCGACCGT CTCGAAAAAT GGCTCTTCTC TGAACCCTAT TTTAACGCCG GCCAGATGGT CTGCGTACAG AAAACCAATA CCACTATCCT GAGCCATGAT GACCTGACCG GTAAAAGGGT TGCGGCCCAA ACCGGCACTA CCGGATTTTT TGAGGCCCAA AAAATAGCTA ACGCTACTGT AAAATCATAC GATGAAATTG GTTTGGCTTT CCAGGACCTT ATCAACGGCC AGATTGACGC CGTTATTTGC GACAACCCGG TAGCCATAGA TTATGTAAAT GCTAACCCCG ACAAACTCAA GAAGGTGGGT ACTGCTTTCA CTGACGAATA CTACGGCATT TCCGTAGCTA AAGGCCAAAC AGAAATCCTG TCCAGGATTA ATCTGGGTCT GGCAGCCGTC ATTGCAGACG GTACGCTTGA CCAGCTTATA GCCAAGTGGA ACTTGAATCC ATAA
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Protein sequence | MKRLSTILMT LLLSSALLFS GCQSSTDDTD DSTATLQITV VTDATWAPFE YVNEQTHAIE GFDIDLMKAI AEKANLEVTF QNVAWDALLA GMATGQYKVA ISSITILPDR LEKWLFSEPY FNAGQMVCVQ KTNTTILSHD DLTGKRVAAQ TGTTGFFEAQ KIANATVKSY DEIGLAFQDL INGQIDAVIC DNPVAIDYVN ANPDKLKKVG TAFTDEYYGI SVAKGQTEIL SRINLGLAAV IADGTLDQLI AKWNLNP
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