Gene Ddes_2272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_2272 
Symbol 
ID7285989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp2735324 
End bp2736046 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content60% 
IMG OID643583094 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_002480845 
Protein GI220905533 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.543841 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACGCC GACAGACCAT ATGTCTTGTG GATGACGACC GGGAAATCCT GGACCTTTTG 
TCCGGCTATC TGAAGAAGCA CGGCTTTGAG GTAAGCTGCG CCGAAAACGG TGATGCGCTT
ATGGATATTC TGCGCCGTGA CAGGCCGGAT CTTATAGTGC TGGATGTCAT GCTGCCCGGG
CAGGACGGCT TTATGGTCTG CCGTGAGGTG CGGAAGCAGT GGCGCATCCC CATTATCTTT
CTGAGCGCGC TGGGTGAAAG CACAGACCGC GTGGTGGGGC TGGAGCTGGG CGCGGACGAC
TACATGGCCA AGCCCTTTGA ACCGCGCGAG CTGCTGGCGC GCATCCGCAG CGTGCTGCGG
CGTAACGAGG GTCTGCCTGT GCCGGCCAGA GAAAGCGGCA GCATGCATTT TTCAGGCTGG
CGTCTGGACA GGGCGTCCCG CTGTCTGCAA TCTCCCTGTG GGGTTATGGT GAACCTGAGC
GGCGCCGAGT ATCGCCTGCT CATGGCTTTT CTTGAAAACC CGCAAACAGT GCTGAGCCGC
GACGCCCTTA TGGACCTGAC CCAGGGCCGC AATGCCGGGG CGTTTGACAG AAGCATAGAC
GTGCAGGTGA GCCGTCTGCG TACCCGCCTG CATGACAAGG GCGGTGAAAA GACTGCGCTC
ATAAAGACTG TGCGCGGCGA CGGCTATATC TGGACGGCGG ATGTGCGCCG GGAAAACGCA
TGA
 
Protein sequence
MERRQTICLV DDDREILDLL SGYLKKHGFE VSCAENGDAL MDILRRDRPD LIVLDVMLPG 
QDGFMVCREV RKQWRIPIIF LSALGESTDR VVGLELGADD YMAKPFEPRE LLARIRSVLR
RNEGLPVPAR ESGSMHFSGW RLDRASRCLQ SPCGVMVNLS GAEYRLLMAF LENPQTVLSR
DALMDLTQGR NAGAFDRSID VQVSRLRTRL HDKGGEKTAL IKTVRGDGYI WTADVRRENA